DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdcd4 and AT1G22730

DIOPT Version :9

Sequence 1:NP_001096977.1 Gene:Pdcd4 / 32337 FlyBaseID:FBgn0030520 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_173687.1 Gene:AT1G22730 / 838879 AraportID:AT1G22730 Length:693 Species:Arabidopsis thaliana


Alignment Length:391 Identity:116/391 - (29%)
Similarity:180/391 - (46%) Gaps:70/391 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 GGKGVWGLPGSEALAEVYEDENDPNYDSE---CNDRNVELREVITEITREEFFKLAEPIVLEYYE 210
            |.:..||:...:.|.:...|..:.|..|:   |.|.::           .|:.|.|..||.||:.
plant    51 GSEETWGVEDDDDLTDPIFDTIEGNGHSDPTSCFDADL-----------SEYKKKATVIVEEYFG 104

  Fly   211 HGDPHEVALSFDEILQAPMREHVTSILVEIAMDHKDSQREMTSVLISDLYGRVITGKDIEKGFNM 275
            ..|...|.....|:..|..|.:....||.:|||..|.::||.:.|:|.||..||...::.:|||.
plant   105 TNDVVSVVNELKELGMAEYRYYFVKKLVSMAMDRHDKEKEMAAFLLSTLYADVIDPPEVYRGFNK 169

  Fly   276 LLANLPDLVLDTPEAPIMLGNFMARAVADDCIPPKFV----------AKSGEELR-----HLGLG 325
            |:|:..||.:|.|:|..:|..|:|||:.||.:||.|:          :|..|.||     :|...
plant   170 LVASADDLSVDIPDAVDVLAVFVARAIVDDILPPAFLKKQMKLLPDNSKGVEVLRKAEKSYLATP 234

  Fly   326 EHAEQALRRADSLIYKHVWAHLDNVWGMGGPLRPVKTITMQMELLLKEYLSSRDVAEAQRCLRAL 390
            .|||...:|         |...|| |       ..:.:..::..|||||:.|.|..||.||::.|
plant   235 LHAEVVEKR---------WGGTDN-W-------TAEDVKARINDLLKEYVMSGDKKEAFRCIKGL 282

  Fly   391 EVPHYHHELVYEAIVMTLESLSQTTEEAMCELLKQLDLTCLVLPAGMEQGFLRAFDDMADIVLDV 455
            :||.:|||:|..|::|.:|  .:..:..:.:|||:.....|:....:.:||.|..|.:.|:.||:
plant   283 KVPFFHHEIVKRALIMAME--RRKAQVRLLDLLKETIEVGLINSTQVTKGFSRIIDSIEDLSLDI 345

  Fly   456 PLAYIILDRFVERCNRAGFLT------------DKIINN---------VPSRGRKRFVSEGDGGH 499
            |.|..||..|:.:....|:|.            :|::.|         ..|..|:.|:| ||...
plant   346 PDARRILQSFISKAASEGWLCASSLKSLSADAGEKLLENSSANVFKDKAKSIIREYFLS-GDTSE 409

  Fly   500 V 500
            |
plant   410 V 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdcd4NP_001096977.1 MA3 197..308 CDD:214714 42/110 (38%)
MA3 363..476 CDD:280933 38/112 (34%)
AT1G22730NP_173687.1 MA3 91..202 CDD:214714 42/110 (38%)
MA3 255..366 CDD:214714 38/112 (34%)
MA3 390..500 CDD:214714 7/22 (32%)
MA3 561..672 CDD:367215
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 80 1.000 Domainoid score I2986
eggNOG 1 0.900 - - E1_KOG0403
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D434771at2759
OrthoFinder 1 1.000 - - FOG0003154
OrthoInspector 1 1.000 - - otm2802
orthoMCL 1 0.900 - - OOG6_103300
Panther 1 1.100 - - O PTHR12626
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2118
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.780

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