DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdcd4 and LOC448531

DIOPT Version :9

Sequence 1:NP_001096977.1 Gene:Pdcd4 / 32337 FlyBaseID:FBgn0030520 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001006815.1 Gene:LOC448531 / 448531 -ID:- Length:439 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdcd4NP_001096977.1 MA3 197..308 CDD:214714
MA3 363..476 CDD:280933
LOC448531NP_001006815.1 MA3 137..248 CDD:214714
MA3 300..413 CDD:214714
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6283
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 321 1.000 Inparanoid score I2474
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D412881at33208
OrthoFinder 1 1.000 - - FOG0003154
OrthoInspector 1 1.000 - - otm48791
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2118
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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