DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9941 and mgrn1b

DIOPT Version :9

Sequence 1:NP_572915.1 Gene:CG9941 / 32330 FlyBaseID:FBgn0030514 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001138254.1 Gene:mgrn1b / 553327 ZFINID:ZDB-GENE-110401-3 Length:549 Species:Danio rerio


Alignment Length:658 Identity:237/658 - (36%)
Similarity:329/658 - (50%) Gaps:157/658 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNFVSRQNAAVEEADPSTNNAYKYPPRMGNFFGTHFIMGGERFDTPQPESYLFGENADLNFLGN 65
            ||:.:||:.|.||:.|...|:||:|||:.||:|.:||.||||:||||.||.||||||.|||||||
Zfish     1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFLGN 65

  Fly    66 RPTAFPYPPPQANEPTKTLKSLVNIRKESVRFVKTMNDKKLGGVLEKPKMKEIDRDLDLDKEKSN 130
            ||..|||..|..:||.|||:|||||||:|:|.|:..:|      .:.|                 
Zfish    66 RPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDD------ADTP----------------- 107

  Fly   131 VTIEDVDGNVLCSMGLGGGDADMTPPPPPCSYNIEFTFDSDAKCAITIYYFCSEDVSPSGVTLVP 195
             |.|.|                    .|...|.:||||||||:.|||:|....|:.|.......|
Zfish   108 -TDEGV--------------------KPRAMYGVEFTFDSDARVAITLYCQAFEEFSNGMAIYSP 151

  Fly   196 RE-GLTSETYHYEKGINQCFSQPSHVFNPQQMPEDELGYSPGREQYPVAIHCVVEEGSDECRQSH 259
            :. .|.|||.:|::|::|.|:.||...:..:..|::|.:...|..:|:.|..||:||.|....:|
Zfish   152 KSPALVSETVYYKRGVSQQFTLPSFKIDFSEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCFGHAH 216

  Fly   260 TTICVIDHHPENGSYVLRALKQKIFVDGLCYLLQEIYGIENKAVNKTS-LDEEIDDHGSECVICM 323
            ..:...:.|.: ||:.::.||||..||.:.||||||||||||...:|. .|:|..|:.:|||:|:
Zfish   217 VLLAAFERHVD-GSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCL 280

  Fly   324 SETRDTLILPCRHLCLCNSCADSLRYQANNCPICRAPFRALLQIRAVQKGISTHVLHQNTPTSAA 388
            |:.|||||||||||||||||||:||||||||||||.|||||||||||:|              ..
Zfish   281 SDLRDTLILPCRHLCLCNSCADTLRYQANNCPICRLPFRALLQIRAVRK--------------KP 331

  Fly   389 GEPAPV-------------------DVPPGYIPVSLIEALNGPPQYVARARNSEHDVTDSAATVA 434
            |..:||                   .||||:.|:||:|||||                       
Zfish   332 GALSPVSFSPVLAQSMDHDEHSSSDSVPPGFEPISLLEALNG----------------------- 373

  Fly   435 ASTMTSADIKATSPIKSSSQRRPKIKKNASTCTSTSEVGTITNQSGGGNGSSTHSVEIESDPKKS 499
                    :.|.||...|:....:|..:.|....:.::.: .:.||...|.       :|...||
Zfish   374 --------MGAVSPGVPSAPLYDEINFSGSLSGESRQLSS-PDHSGDSAGQ-------KSKVSKS 422

  Fly   500 STATCTSPTLGASTSPEPKQDKLQIVNERKYPR--STAGSGGDGSAGTDDDVDSENEKLSPLLSP 562
            ..:|..||   :|...|..::||..:::.:...  |::.:..:|:|| ||..||        |||
Zfish   423 PDSTLRSP---SSPIQEEDEEKLSEMSDAQAHMLLSSSPAPTEGTAG-DDAPDS--------LSP 475

  Fly   563 GSKSKNVSSKSLKQVVACLEADDDVD-NKSSTGDGPTEESSLKKGSSIKRTKPRPELSGSGAPSP 626
                               |.:|.:: ::.:..|..:|.||..|..|    :...:||..|....
Zfish   476 -------------------EEEDHLNLDEEAMNDCSSEHSSFTKTES----ETPGDLSLPGFSDS 517

  Fly   627 AEATAEDS 634
            :|:.:..|
Zfish   518 SESLSTQS 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9941NP_572915.1 zf-C3HC4_3 318..360 CDD:290631 36/41 (88%)
mgrn1bNP_001138254.1 PHA02929 <230..329 CDD:222944 69/98 (70%)
zf-C3HC4_3 272..317 CDD:290631 36/44 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579519
Domainoid 1 1.000 247 1.000 Domainoid score I2117
eggNOG 1 0.900 - - E1_KOG4265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 374 1.000 Inparanoid score I2061
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D172099at33208
OrthoFinder 1 1.000 - - FOG0001616
OrthoInspector 1 1.000 - - otm25573
orthoMCL 1 0.900 - - OOG6_102038
Panther 1 1.100 - - O PTHR22996
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1025
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.760

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