DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mrgn1 and mgrn1b

DIOPT Version :10

Sequence 1:NP_572915.1 Gene:Mrgn1 / 32330 FlyBaseID:FBgn0030514 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001138254.1 Gene:mgrn1b / 553327 ZFINID:ZDB-GENE-110401-3 Length:549 Species:Danio rerio


Alignment Length:658 Identity:237/658 - (36%)
Similarity:329/658 - (50%) Gaps:157/658 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNFVSRQNAAVEEADPSTNNAYKYPPRMGNFFGTHFIMGGERFDTPQPESYLFGENADLNFLGN 65
            ||:.:||:.|.||:.|...|:||:|||:.||:|.:||.||||:||||.||.||||||.|||||||
Zfish     1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFLGN 65

  Fly    66 RPTAFPYPPPQANEPTKTLKSLVNIRKESVRFVKTMNDKKLGGVLEKPKMKEIDRDLDLDKEKSN 130
            ||..|||..|..:||.|||:|||||||:|:|.|:..:|      .:.|                 
Zfish    66 RPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDD------ADTP----------------- 107

  Fly   131 VTIEDVDGNVLCSMGLGGGDADMTPPPPPCSYNIEFTFDSDAKCAITIYYFCSEDVSPSGVTLVP 195
             |.|.|                    .|...|.:||||||||:.|||:|....|:.|.......|
Zfish   108 -TDEGV--------------------KPRAMYGVEFTFDSDARVAITLYCQAFEEFSNGMAIYSP 151

  Fly   196 RE-GLTSETYHYEKGINQCFSQPSHVFNPQQMPEDELGYSPGREQYPVAIHCVVEEGSDECRQSH 259
            :. .|.|||.:|::|::|.|:.||...:..:..|::|.:...|..:|:.|..||:||.|....:|
Zfish   152 KSPALVSETVYYKRGVSQQFTLPSFKIDFSEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCFGHAH 216

  Fly   260 TTICVIDHHPENGSYVLRALKQKIFVDGLCYLLQEIYGIENKAVNKTS-LDEEIDDHGSECVICM 323
            ..:...:.|.: ||:.::.||||..||.:.||||||||||||...:|. .|:|..|:.:|||:|:
Zfish   217 VLLAAFERHVD-GSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCL 280

  Fly   324 SETRDTLILPCRHLCLCNSCADSLRYQANNCPICRAPFRALLQIRAVQKGISTHVLHQNTPTSAA 388
            |:.|||||||||||||||||||:||||||||||||.|||||||||||:|              ..
Zfish   281 SDLRDTLILPCRHLCLCNSCADTLRYQANNCPICRLPFRALLQIRAVRK--------------KP 331

  Fly   389 GEPAPV-------------------DVPPGYIPVSLIEALNGPPQYVARARNSEHDVTDSAATVA 434
            |..:||                   .||||:.|:||:|||||                       
Zfish   332 GALSPVSFSPVLAQSMDHDEHSSSDSVPPGFEPISLLEALNG----------------------- 373

  Fly   435 ASTMTSADIKATSPIKSSSQRRPKIKKNASTCTSTSEVGTITNQSGGGNGSSTHSVEIESDPKKS 499
                    :.|.||...|:....:|..:.|....:.::.: .:.||...|.       :|...||
Zfish   374 --------MGAVSPGVPSAPLYDEINFSGSLSGESRQLSS-PDHSGDSAGQ-------KSKVSKS 422

  Fly   500 STATCTSPTLGASTSPEPKQDKLQIVNERKYPR--STAGSGGDGSAGTDDDVDSENEKLSPLLSP 562
            ..:|..||   :|...|..::||..:::.:...  |::.:..:|:|| ||..||        |||
Zfish   423 PDSTLRSP---SSPIQEEDEEKLSEMSDAQAHMLLSSSPAPTEGTAG-DDAPDS--------LSP 475

  Fly   563 GSKSKNVSSKSLKQVVACLEADDDVD-NKSSTGDGPTEESSLKKGSSIKRTKPRPELSGSGAPSP 626
                               |.:|.:: ::.:..|..:|.||..|..|    :...:||..|....
Zfish   476 -------------------EEEDHLNLDEEAMNDCSSEHSSFTKTES----ETPGDLSLPGFSDS 517

  Fly   627 AEATAEDS 634
            :|:.:..|
Zfish   518 SESLSTQS 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrgn1NP_572915.1 PEX10 <255..359 CDD:227861 61/104 (59%)
RING_Ubox 314..372 CDD:473075 48/57 (84%)
mgrn1bNP_001138254.1 mRING-HC-C3HC5_RNF157 270..329 CDD:438466 48/58 (83%)

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