DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXD4 and ftz

DIOPT Version :10

Sequence 1:NP_055436.2 Gene:HOXD4 / 3233 HGNCID:5138 Length:255 Species:Homo sapiens
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:194 Identity:76/194 - (39%)
Similarity:96/194 - (49%) Gaps:53/194 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    87 GHYAAPGEPCPAPPAPPPA--PLPGARAYSQSDPKQPP---SGTALKQPAVVYPWMKKVHVNS-- 144
            |.:|.|      ||..|.:  ||.|.     |.|.|.|   |.:|:.|           .:|.  
  Fly   186 GDFATP------PPTTPTSLPPLEGI-----STPPQSPGEKSSSAVSQ-----------EINHRI 228

Human   145 -VNPNYTGG---------------EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCL 193
             ..||..|.               :.||:|..|||.|.||||||||||||:||||||:||:.|.|
  Fly   229 VTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSL 293

Human   194 SERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSS-------SSSCSSSVAPSQHLQPMAKDHHT 250
            |||||||||||||||.|||..|.::.....:..:       ::|.:::.|||..: ||...|.|
  Fly   294 SERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATTGAPSVPV-PMYHHHQT 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXD4NP_055436.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..127 14/44 (32%)
Antp-type hexapeptide 133..138 0/4 (0%)
Homeodomain 155..211 CDD:459649 44/55 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..255 10/46 (22%)
ftzNP_477498.1 FTZ 1..248 CDD:397787 20/83 (24%)
Homeodomain 255..311 CDD:459649 44/55 (80%)
KLF1_2_4_N <321..404 CDD:425360 8/37 (22%)

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