DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXD4 and CG9876

DIOPT Version :10

Sequence 1:NP_055436.2 Gene:HOXD4 / 3233 HGNCID:5138 Length:255 Species:Homo sapiens
Sequence 2:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster


Alignment Length:189 Identity:43/189 - (22%)
Similarity:69/189 - (36%) Gaps:74/189 - (39%)


- Green bases have known domain annotations that are detailed below.


Human    62 FGGSGPGPGSA-LPARGHGQEPGGPGGHYAAPGEPCPAPPAPPPAPLPGARAYSQSDPKQPPSGT 125
            ||.:|.|.|.| .||...|..|.| |||::.                                  
  Fly    86 FGPTGAGCGGADRPAPCSGNLPAG-GGHHSR---------------------------------- 115

Human   126 ALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT 190
                                       :|:|:||.::..|:..|||.|....|.....|.|:|..
  Fly   116 ---------------------------KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATK 153

Human   191 LCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSSSCSSSVAPSQHLQPMAKDHH 249
            :.|||.::::||||||.|::::.       ||..|.:....:..:.|:    |::.:.|
  Fly   154 VHLSEARVQVWFQNRRAKFRRNE-------RSVGSRTLLDTAPQLVPA----PISNNMH 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXD4NP_055436.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..127 14/65 (22%)
Antp-type hexapeptide 133..138 0/4 (0%)
Homeodomain 155..211 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..255 6/38 (16%)
CG9876NP_611756.1 Homeodomain 118..174 CDD:459649 22/55 (40%)

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