DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nadsyn and Nadsyn1

DIOPT Version :10

Sequence 1:NP_572913.1 Gene:Nadsyn / 32328 FlyBaseID:FBgn0030512 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_852145.2 Gene:Nadsyn1 / 353255 RGDID:727801 Length:725 Species:Rattus norvegicus


Alignment Length:732 Identity:435/732 - (59%)
Similarity:536/732 - (73%) Gaps:16/732 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRKVTVAVSTLNQWALDFEGNMVRILQSILEAKDMGASYRTGPELEVCGYSCEDHFREPDTFLH 65
            ||||||||...|||||||||||..|||:||..||..||.||.|||||:|||.|.||:.|.||.||
  Rat     1 MGRKVTVATCALNQWALDFEGNFQRILKSIQIAKGKGARYRLGPELEICGYGCWDHYHESDTLLH 65

  Fly    66 SWEVLLEVMMSPMCENMLVDVGMPVMHRNVAYNCRVAFFNRQILLIRPKMAMCDDGNYRESRWFT 130
            |.:||..::.:|..::::.|||||:|||||.|||||.|.||:|||||||||:.::|||||.||||
  Rat    66 SLQVLAALLDAPATQDIICDVGMPIMHRNVRYNCRVIFLNRKILLIRPKMALANEGNYRELRWFT 130

  Fly   131 AWTKALQTEEYVLPRMIAQHTGQQTVPFGDAVIATRDTCLGYEICEELWNVRSKHIEMSLAGVEL 195
            .|.::.||||||||||:...|.|:||||||.|:||:|||:|.|||||||...|.|:.|.|.|||:
  Rat   131 PWARSRQTEEYVLPRMLQDLTKQKTVPFGDVVLATQDTCIGSEICEELWTPCSPHVNMGLDGVEI 195

  Fly   196 IVNSSGSYMELRKAHITSDLIRNASFKAGGAYLFSNLRGCDGQRVYFNGCSAIALNGEILARSQQ 260
            |.|:|||:..|||||...||:..|:.|.||.||.:|.:||||.|:|::||:.||:||.|.|:..|
  Rat   196 ITNASGSHHVLRKAHTRVDLVTMATSKNGGIYLLANQKGCDGDRLYYDGCAMIAMNGSIFAQGTQ 260

  Fly   261 FALQDVEVTLATIDLEEIRAYRVSLRSRCTAAASAAEYPRIHCDFEMSTHSDIFKTSTPPLNWPM 325
            |:|.||||..||:|||::|:||..:.||...|.....|||:..||.:|...|:.:..:.|:.|..
  Rat   261 FSLDDVEVLTATLDLEDVRSYRAEISSRNLEATRVNPYPRVTVDFALSVSEDLLEPVSEPVEWTY 325

  Fly   326 HTPEEEIALGPACWLWDYLRRSGQGGFFLPLSGGVDSSSSATIVHSMCRQIVQAVQQGDAQVLHD 390
            |.|||||:|||||||||:||||.|.||||||||||||::||.:|:|||..:.:||:.|:.|||.|
  Rat   326 HRPEEEISLGPACWLWDFLRRSNQAGFFLPLSGGVDSAASACVVYSMCCLVCEAVKSGNQQVLTD 390

  Fly   391 IRQLLADSDYTPDNAAGLCNRLLVTCYMGSVNSSKETRRRAAQLANQLGSYHIEISIDSAVNALL 455
            ::.|:.:|.|||.:...||.|||.||||.|.|||:||..||.:||.|:|||||.::||.||.|:|
  Rat   391 VQNLVDESSYTPQDPRELCGRLLTTCYMASENSSQETHNRATKLAQQIGSYHISLNIDPAVKAIL 455

  Fly   456 SIFNAVTGLTPRFRTQGGCARQNLALQNMQSRIRMVLAYIFAQLTLWVRNRPGGLLVLGSANVDE 520
            .||:.|||..|||...||.:|:||||||:|:||||||||:||||:||.|...|.|||||||||||
  Rat   456 GIFSLVTGKFPRFSAHGGSSRENLALQNVQARIRMVLAYLFAQLSLWSRGARGSLLVLGSANVDE 520

  Fly   521 SLRGYLTKYDCSSADINPIGGISKMDLRRFLTYAKDKFNLPVLESIIDAPPTAELEPLQENGELQ 585
            ||.|||||||||||||||||||||.|||.|:....::|.||||::|:.||.|||||||.: |::.
  Rat   521 SLLGYLTKYDCSSADINPIGGISKTDLRAFVQLCAERFQLPVLQAILSAPATAELEPLAD-GQVS 584

  Fly   586 QTDEADMGMTYAELSQFGRLRKQSFCGPYSMFCHLVATWKSDLSPKEVAEKVKHFFLCYAINRHK 650
            |.||.||||||.|||.||||||.:..|||||||.|:..||...:|::||||||.||..|:|||||
  Rat   585 QMDEEDMGMTYTELSIFGRLRKVAKAGPYSMFCKLLNMWKDSCTPRQVAEKVKRFFSKYSINRHK 649

  Fly   651 MTVLTPSVHAESYSPDDNRFDHRPFLYRPNWSWQFKAIDDEAEKLQPIYTPSSAQLRPSSEDLLI 715
            ||.|||:.|||:|||||||||.|||||...|.|||..||::..:|:          |.:|:.|  
  Rat   650 MTTLTPAYHAENYSPDDNRFDLRPFLYNTRWPWQFLCIDNQVVQLE----------RKTSQTL-- 702

  Fly   716 STQRSSHLDDSKHSSPL 732
            ..|...|.   |..||:
  Rat   703 EEQIQEHF---KEPSPI 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NadsynNP_572913.1 PLN02339 3..695 CDD:177973 424/691 (61%)
Nadsyn1NP_852145.2 PLN02339 3..698 CDD:177973 426/705 (60%)
Ligase. /evidence=ECO:0000250 325..706 244/393 (62%)

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