DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12177 and NSH4

DIOPT Version :10

Sequence 1:NP_572911.1 Gene:CG12177 / 32326 FlyBaseID:FBgn0030510 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_197390.1 Gene:NSH4 / 832007 AraportID:AT5G18890 Length:550 Species:Arabidopsis thaliana


Alignment Length:415 Identity:97/415 - (23%)
Similarity:162/415 - (39%) Gaps:117/415 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VENGRGGGGEGVAAAPSPRYAILDCDGGSDDAWALLLLLHA-AKSHGIHLLAITTMGCGNTSREN 70
            :.|.|.||          :..:.|.|..:.|..:|..||.. .:...:..:.::..|..||:..:
plant   154 LNNSRLGG----------KPVVFDMDMSAGDFLSLFYLLKVPVEIIDLKAVIVSPTGWANTATID 208

  Fly    71 AARNMRRILDACKRTDIPIYLGAVDAL------IPSLEDEKKYFHGRDGFGDCLTDDCALQL-ED 128
            ...::..::.   |.|||:.||.:.|:      .||..|.|.......|.|..|..|....| .|
plant   209 VVYDLLHMMG---RDDIPVGLGDMFAINQSEPVFPSAGDCKYAKAVPQGCGGFLDSDTLYGLARD 270

  Fly   129 IVQA----EHAVT--AIHDLCRSRPKQ-------------------ITIFAVGPLTNLALGYTMY 168
            :.::    |::|.  |..|..|...:|                   ||:...||||:||   .:.
plant   271 LPRSPRRYENSVAHGAPSDTDRPELRQPLALEVWQNLTKSVDEVSKITVLTNGPLTSLA---KII 332

  Fly   169 GPEFGNN--FRDLFIMGGNY----QGVGN-----SSRSAEFNFHSDPEAAHTVLLRTRCPITILP 222
            ..:..::  .::::|:||:.    ...||     |:..||||...||.||.|| |.:...||::|
plant   333 SSDKNSSSIIKEVYIVGGHISRGKSDKGNIFTVPSNSYAEFNMFLDPLAAKTV-LESGLNITLIP 396

  Fly   223 --------WEACL---------PE-RFNIHINWRLKDFAARAKEAGHPAITMLNQVEAAQWLPMI 269
                    ::|.|         || ||...:..||:  |...|:..:..:.|.            
plant   397 LATQREFSFQAMLNRLYSSTKTPEARFVKRLLTRLQ--ALHQKQRRYMHMDMF------------ 447

  Fly   270 EQYGIDTWNPCDAIAVAVWLFEDH--LIRRHNTWHATVDLRGTHTR-GQMVLDHLREREKYPENV 331
                      ...|..|::|..||  |..:..|.:..|...|..:: |.:::|.||.::     :
plant   448 ----------LGEILGAIFLGGDHALLKPKMRTEYIKVIAEGDESKDGHILIDKLRGKQ-----I 497

  Fly   332 RIIELVDVEFFKRIC--EWIAGLDD 354
            :|:|.||:    |.|  .:.:.|||
plant   498 KILERVDL----RGCYESFASRLDD 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12177NP_572911.1 nuc_hydro_CeIAG 25..347 CDD:239115 90/388 (23%)
NSH4NP_197390.1 nuc_hydro 162..517 CDD:469670 90/394 (23%)

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