DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11162 and Ch25h

DIOPT Version :10

Sequence 1:NP_572910.1 Gene:CG11162 / 32325 FlyBaseID:FBgn0030509 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_001020586.1 Gene:Ch25h / 309527 RGDID:1310575 Length:298 Species:Rattus norvegicus


Alignment Length:277 Identity:80/277 - (28%)
Similarity:120/277 - (43%) Gaps:52/277 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LQDKWTLLLDTV--GEESWRLWVVGSTV--VIFIVYWLYAGI---FTLMDITNRP--RFLRKYKI 70
            ||..|    |::  ||.|.|     |..  |||.:: .|.|.   |.::|:. .|  ..||:|||
  Rat    20 LQPLW----DSIRTGEASAR-----SPFFPVIFSIF-TYLGFCLPFVVLDVL-CPWVPILRRYKI 73

  Fly    71 QPGQNEPVNLAKLWHAVKVVLFNLTVVNF---LVSWVVYEFVYKSENSQDIRVLPTFKRSLRDLV 132
            .|..:..|.  :|...:.:.|:...|..|   |:.|           ::...:||.....|..|:
  Rat    74 HPDFSPSVR--QLLPCLGLTLYQHLVFVFPVTLMHW-----------ARSPALLPREAPELSQLL 125

  Fly   133 VFVVLEEIMF---YYAHRLLHHRS--VYKYVHKKHHEWTAPIAAITLYAHPVEHVLANLLPVATS 192
            ..|::..::|   .:|..||||:.  :|:..||.||:.::..|..|.|....|.:......| .:
  Rat   126 SHVLICLLLFDTEIFAWHLLHHKVPWLYRTFHKVHHQNSSSFALATQYMSVWELLSLTFFDV-LN 189

  Fly   193 IAILGTHVALAYVIFALAIINSMSDHTGYSFPWSA---------GSVRFHDYHHAKFNYNYG-VL 247
            :|:|..|.....|...:.|..|:.||:||.||||.         |.|..||.||::||.|:. ..
  Rat   190 VAMLQCHPLTILVFHVVNIWLSVEDHSGYDFPWSTHRLVPFGWYGGVAHHDLHHSQFNCNFAPYF 254

  Fly   248 GFLDKLHGTYRAPAEQK 264
            ...||:.||.|.....|
  Rat   255 THWDKMLGTLRCAPHSK 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11162NP_572910.1 FA_hydroxylase 131..256 CDD:397991 43/139 (31%)
Ch25hNP_001020586.1 FA_hydroxylase 128..263 CDD:397991 42/135 (31%)
Histidine box-1 142..146 1/3 (33%)
Histidine box-2 157..161 2/3 (67%)
Histidine box-3 238..244 3/5 (60%)

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