DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11164 and Rnaseh2b

DIOPT Version :9

Sequence 1:NP_001285220.1 Gene:CG11164 / 32323 FlyBaseID:FBgn0030507 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_080277.1 Gene:Rnaseh2b / 67153 MGIID:1914403 Length:308 Species:Mus musculus


Alignment Length:324 Identity:96/324 - (29%)
Similarity:140/324 - (43%) Gaps:43/324 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SALKKVFFMSEELLPKDADDGHLRLEMFF------HPGHGKEALFITHPDGRMMELVAFTEPRRS 85
            :|.:.||.:.|.|  |||.....:..:.|      |.|.|...| |.....::.|:..|.|...|
Mouse    11 AARQLVFLLPEHL--KDASKKKKKSSLLFVKLANPHSGEGATYL-IDMCLQQLFEIKVFKEKHHS 72

  Fly    86 WFVDSEVCSNGRIYMTAPVDPTFLALHHLRKHCAQ-RAISLDNIAVEEA--STSRLLNEILDPGN 147
            ||::..|.|.|.::...|:||.||.||:|.|...: :...||.:.|::.  ..:.||.......:
Mouse    73 WFINQSVQSGGLLHFATPMDPLFLLLHYLLKAGKEGKYQPLDQVVVDDTFPDCTLLLRFPELEKS 137

  Fly   148 LKCVADVKSSGEQKFYKYNQERTLAWLALKTRQVAKILKEKQVHCGHSAQSQNFVRSEKLVAENV 212
            |:.|.:.|....:|:|||:.|:||.||..|..|....||...|:.|...||..:....::..:  
Mouse   138 LRHVTEEKEVNSKKYYKYSSEKTLKWLEKKVNQTVVALKANNVNVGARVQSSAYFSGGQVSRD-- 200

  Fly   213 SNEMDYTRMACDYVGRYLDADLHGLLTSYLHIPSEIQAIVEEKAASQKRKSVAGKNEGSDSKKIK 277
             .|.||.|.|...:..|:..:|...|:.:|.:|        |..||.         ....|||:|
Mouse   201 -KEEDYVRYAHGLISDYIPKELSDDLSKFLKLP--------EPPASL---------TNPPSKKLK 247

  Fly   278 LNESDAAAKLKSSGLVDSDGDPNATITSPTAAPLKERSLTAKEKALAKGAK-GTKSIASFFKAK 340
            |::....||          .|.....|.......|...:||.:|||||..| |.|||.:||.||
Mouse   248 LSDEPVEAK----------EDYTKFNTKDLKTGKKNSKMTAAQKALAKVDKSGMKSIDAFFGAK 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11164NP_001285220.1 RNase_H2-B 39..338 CDD:187751 89/308 (29%)
Rnaseh2bNP_080277.1 RNase_H2-B 16..299 CDD:187751 92/315 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848669
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4705
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41572
Inparanoid 1 1.050 104 1.000 Inparanoid score I4933
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59373
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005677
OrthoInspector 1 1.000 - - oto93410
orthoMCL 1 0.900 - - OOG6_104396
Panther 1 1.100 - - LDO PTHR13383
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10927
SonicParanoid 1 1.000 - - X6122
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

Return to query results.
Submit another query.