DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11164 and rnaseh2b

DIOPT Version :9

Sequence 1:NP_001285220.1 Gene:CG11164 / 32323 FlyBaseID:FBgn0030507 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_021334305.1 Gene:rnaseh2b / 393241 ZFINID:ZDB-GENE-040426-1090 Length:306 Species:Danio rerio


Alignment Length:348 Identity:104/348 - (29%)
Similarity:161/348 - (46%) Gaps:62/348 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TRARKPKADPDAEGSAKMCKASAL---KKVFFMSEELLPKDADDGHLRLEMFFHPGHGKEALFIT 67
            |..:|..|..:::....:...|||   :.|          |:|...::|:   :|..|..:|::.
Zfish     2 TSKKKRSAHTESDSWVVIAPDSALDTGRSV----------DSDPSFIKLK---NPSTGSSSLYLF 53

  Fly    68 H-PDGRMMELVAFTEPRRSWFVDSEVCSNGRIYMTAPVDPTFLALHHLR------KHCAQRAISL 125
            . .|..:.|:.||:|..||||:...|..:||:....|:||.||.|.::.      |..:.:.:.:
Zfish    54 GCGDLSVYEVKAFSEDFRSWFIGQTVQRDGRLLYVTPMDPLFLLLPYISSVGKEGKFQSVKQMVM 118

  Fly   126 DNIAVEEASTSRLL--NEILDPGNLKCVADVKSSGEQKFYKYNQERTLAWLALKTRQVAKILKEK 188
            |.   :....||||  .:.||  :|..|||.|...:||::|||.|:||.||..|.::....||:.
Zfish   119 DE---DYPGCSRLLQCKQGLD--SLHHVADEKEVNDQKYHKYNLEKTLEWLKKKVQRTVNALKKG 178

  Fly   189 QVHCGHSAQSQNFVRSEKLVAENVSNEMDYTRMACDYVGRYLDADLHGLLTSYLHIPSEIQAIVE 253
            .:..|...:|..|||    |....::|.||.|.|...:..|:..||...|..:|.:| ||.:..|
Zfish   179 NISVGGGVKSSTFVR----VKHEDASEEDYLRYAHGLISEYISEDLSKDLLKHLELP-EISSPKE 238

  Fly   254 EKAASQKRKSVAGKNEGSDSKKIKLNESDAAAKLKSSGLVDSDGDPNATITSPTAAPLKERSLTA 318
            .:..|:||| ::.|...:.....|.|.:|.|.|                       |.|:  :||
Zfish   239 AEPPSKKRK-LSDKPVEAGEDYTKFNSADFARK-----------------------PPKK--MTA 277

  Fly   319 KEKALAKGAK-GTKSIASFFKAK 340
            .:|:|||..| |.||:||||..|
Zfish   278 AQKSLAKADKTGMKSLASFFSPK 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11164NP_001285220.1 RNase_H2-B 39..338 CDD:187751 95/308 (31%)
rnaseh2bXP_021334305.1 RNase_H2-Ydr279 17..297 CDD:312838 98/328 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594184
Domainoid 1 1.000 60 1.000 Domainoid score I10590
eggNOG 1 0.900 - - E1_KOG4705
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41572
Inparanoid 1 1.050 114 1.000 Inparanoid score I4814
OMA 1 1.010 - - QHG59373
OrthoDB 1 1.010 - - D1092212at2759
OrthoFinder 1 1.000 - - FOG0005677
OrthoInspector 1 1.000 - - oto38960
orthoMCL 1 0.900 - - OOG6_104396
Panther 1 1.100 - - LDO PTHR13383
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6122
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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