Protein Alignment DNAlig4 and LIG1

DIOPT Version :9

• Sequence 1: NP_572907.1
• Gene: DNAlig4 / 32322
• FlyBaseID: FBgn0030506
• Length: 918
• Species: Drosophila melanogaster
• Sequence 2: NP_172293.2
• Gene: LIG1 / 837333
• AraportID: AT1G08130
• Length: 790
• Species: Arabidopsis thaliana
• Alignment Length: 610
• Identity: 149/610 - (24%)
• Similarity: 236/610 - (38%)
• Gaps: 104/610 - (17%)

  Fly    59 PEDGASSFYSVLRLLLPGAD-----TGRDTYGLQIT-ALGRLYIRVLQLPTDSSDAIRLQHRNGN 117
            |||..::.|.....:.|..:     .|..|....|: |.||....|.:..|:..|.       |.
plant   212 PEDLVATVYLSANEIAPAHEGVELGIGESTIIKAISEAFGRTEDHVKKQNTELGDL-------GL 269

  Fly   118 MYRDYGDVVYSVLKPRCFNPPSNLRLKEIHQMLDTIANEDTEVKQQQLIRFTEQASPE-EQKWLI 181
            :.:........:.||   .|.:.:::.:..:.:...:.:|:..|::..::....|:.: |..:|.
plant   270 VAKGSRSTQTMMFKP---EPLTVVKVFDTFRQIAKESGKDSNEKKKNRMKALLVATTDCEPLYLT 331

  Fly   182 RLLLKSLGLGIGEQKIFGVLHPKAQDIYQRCSDLGHVCNLLADRTTDLDASSSKDSKAAVKFVNL 246
            |||...|.||...|.:...|...|  :|.             :..:....::....:.|.|.|..
plant   332 RLLQAKLRLGFSGQTVLAALGQAA--VYN-------------EEHSKPPPNTKSPLEEAAKIVKQ 381

  Fly   247 NSVIRPFHQ-------------------------IRPMLCERFPG--DIQELMQSDVLYLETKMD 284
            ...:.|.:.                         |.|||.:...|  :|....|..|...|.|.|
plant   382 VFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYD 446

  Fly   285 GERFQLH-IDRGRFMYISRNGVDYTRNFGHSYDHGTLTPKLRGLLPLGLESIILDGEMMVWDTNK 348
            |||.|:| ::.|.|...|||.   .||.|...|......:|:   ...::|.|||.|::.:|..|
plant   447 GERAQIHFMEDGTFEIYSRNA---ERNTGKYPDVALALSRLK---KPSVKSFILDCEVVAFDREK 505

  Fly   349 ---LRFR----EKGENTDVKSLKPEGSWQPCFVVYDLLYFNGQSLLDHTYIQRAYKLQKLIVEQS 406
               |.|:    ...:|.:|..:|.    ..|...:|:||.|||.|:......|..||.:...|..
plant   506 KKILPFQILSTRARKNVNVNDIKV----GVCIFAFDMLYLNGQQLIQENLKIRREKLYESFEEDP 566

  Fly   407 GVLQLMRARKIGSVQEFNELFQQALDSHAEGIVLKKQGS--RYQPGVRLGGGWYKDKADYIKGLI 469
            |..|...|.....:.|..:....::|...||:::|...|  .|:|..| ...|.|.|.||:..:.
plant   567 GYFQFATAVTSNDIDEIQKFLDASVDVGCEGLIIKTLDSDATYEPAKR-SNNWLKLKKDYMDSIG 630

  Fly   470 TEFDVLIIGAFYNR-KRTFV-DSFLLGVLQPAPPGSSNRPEVFSIGVVANNTKQRGVLNHTLKPH 532
            ...|::.|.||:.| |||.| .:|||...      ..::.|..||..:...... .:|:......
plant   631 DSVDLVPIAAFHGRGKRTGVYGAFLLACY------DVDKEEFQSICKIGTGFSD-AMLDERSSSL 688

  Fly   533 WHDVVNEPPPLWFHYKPKERSGCPDLWIEPQNSVILQVKAADL-------APNGAFFTRK--SLH 588
            ...|:..|..   :|:..: |..||:|.||  :.:.:||||||       |..|.....|  ||.
plant   689 RSQVIATPKQ---YYRVGD-SLNPDVWFEP--TEVWEVKAADLTISPVHRAATGIVDPDKGISLR 747

  Fly   589 FPRTEMKRDDKTWSECMTLKEFNDL 613
            |||....|:||...|..:.::..||
plant   748 FPRLLRVREDKKPEEATSSEQIADL 772

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
DNAlig4	NP_572907.1	DNA_ligase_A_N	10..197	CDD:282522	30/144 (21%)
		dnl1	84..613	CDD:273147	140/578 (24%)
		Adenylation_DNA_ligase_IV	249..466	CDD:185713	68/253 (27%)
		OBF_DNA_ligase_IV	469..607	CDD:153437	43/148 (29%)
		BRCT	668..745	CDD:214602
LIG1	NP_172293.2	PLN03113	49..790	CDD:215584	149/610 (24%)
		DNA_ligase_A_N	176..347	CDD:282522	30/144 (21%)
		Adenylation_DNA_ligase_I_Euk	407..625	CDD:185710	65/228 (29%)
		OBF_DNA_ligase_I	630..775	CDD:153438	45/156 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1793
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D274264at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820