DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2691 and Rrp12

DIOPT Version :9

Sequence 1:NP_001285218.1 Gene:CG2691 / 32320 FlyBaseID:FBgn0030504 Length:1384 Species:Drosophila melanogaster
Sequence 2:XP_003749166.1 Gene:Rrp12 / 679127 RGDID:1591867 Length:1293 Species:Rattus norvegicus


Alignment Length:1416 Identity:429/1416 - (30%)
Similarity:696/1416 - (49%) Gaps:166/1416 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GKFRS----KLKRNGKGKTWSRGESATSNPTQMKHRMKAKSRFFQPNLSLAAATTTGLTMEAVHK 62
            ||..|    ||||      |.:|.|:.||||..:||..|:||||.     ..:..:.||::||..
  Rat     5 GKLPSGVSAKLKR------WKKGHSSDSNPTTCRHRQAARSRFFS-----RPSGKSDLTVDAVKL 58

  Fly    63 HEQSQAFNAETTTVNDVAGSLRSFKLDDDDDGMSGSGTAPTGTAPTG-----TIKTFQTFASNYS 122
            |.:.|            :|:|           ..|...||..|....     |.|:..||.|..|
  Rat    59 HNELQ------------SGTL-----------SLGKSQAPETTMDQDPEVAFTEKSSGTFLSGLS 100

  Fly   123 GCSNTCFQKLVTSFRSSSALHKEMLAILSALTEIIRENGGGESSTEYFLLLMEQIEAATEERDIV 187
            .|:|..|.|:...:.|:||.|||:.|:|:|:||:||..||.|:.||||..||..:||......:.
  Rat   101 DCTNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAVESPESLA 165

  Fly   188 AGVTLLAMGINSVPAPVLKKRFAQTADTMQRLLQRFMESTNQSVIRHVIGCLSVILRAQDYAAWS 252
            |...||.:.:..||:|||.|:|:.|:.....::.....|.:.|.:|.|:.||:::||.||..||.
  Rat   166 AVAYLLNLVLKRVPSPVLMKKFSDTSKAFMNIMSAQASSGSTSALRWVLSCLAILLRKQDLEAWG 230

  Fly   253 YSSTFQYFDAILAFSIHSQPKIRKAAQHAIALIIHGSCFMLPAIKSDDNEMDEAVEQPKVKHHPA 317
            |..|.|.:..:|:|::|::||:||||||.:..::.||.||.            ..|.|  .||||
  Rat   231 YPITLQVYHGLLSFTVHAKPKVRKAAQHGVCSVLKGSDFMF------------GEEAP--AHHPA 281

  Fly   318 SSRVAKFCLAQFKPEVLANAQTTVLHTLELLKDTLYGFKTEDIRSVCEHLLSIMTAANVLVRTNC 382
            :...||||:.:.:....:...||.||.|.||||.|..|....::|..|.||.:||..:|||....
  Rat   282 AVSTAKFCIQEIEKSGGSREATTTLHMLTLLKDMLPCFPEGLVKSCSETLLRVMTLNHVLVTACA 346

  Fly   383 FQTLYSLF-LKKSPN-LNASLCAKLLAAIHEYRPDKSDIRQTIAWVTVLKEGHLHLATMQLDLCM 445
            .|..::|| .|.||: |:|.|.|:::.|:::|.|.::|::..:||:.|:::.|::|..:|.||.:
  Rat   347 MQAFHNLFHAKPSPSTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQRDLGL 411

  Fly   446 QALPRLIDVCTTDLWLSDQKELVAGVSNCIKELLQDCVSRACA----TAEDAQCNRQSVSRIIAS 506
            ..|.|...:..|.| ||...::||..:..:||:|::||:...|    ....|....|.::::..:
  Rat   412 GHLARFFGIAVTCL-LSPHSQVVAAATQTLKEILRECVAPHVADIGSVTSSASGPPQYIAKMFRA 475

  Fly   507 LHKMLNAPFGEISRFVILIFSFVFEACGKLFGSELTPPLMTICK-RYDTQSAHRLQIEHTVISAI 570
            :.:.|...|......|:.:....||||||.....:...|.::|. |......|...::..|.:|:
  Rat   476 VEEGLTYRFHAAWSSVLQLLGVFFEACGKQAHPVMKKCLQSLCDLRLSPHFPHTAALDQAVGAAV 540

  Fly   571 KALGPELVLTAIPL-ADG-KGVMQLERSWLLPLLREGANGASLQFFKEKIVALAMDCQLKWKEFA 633
            .::|||:||.|:|| .|| :..:...||||||::|:......|.||....:.||...:.|..:.|
  Rat   541 TSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVRETRLGFFTTYFLPLATALKRKAMDLA 605

  Fly   634 EAKNNSSSHIYELLCCQLWGLFPGFCRQPRD-PEYLRYLAPTLGAAVEKNPEFRPPIYDGLMELL 697
            :|.:...|.||:.|..|:|.|.||||.:|.| ....:.||.|||.|:.:.|:.|..:...|..|:
  Rat   606 QAGSAVESKIYDTLQWQIWTLLPGFCIRPTDVAASFKGLARTLGTAISERPDLRVTVCQALRTLI 670

  Fly   698 GDNQSAECHQA-IGQYAKNFLPRLFNIYTQKPNGTYEAD-QRKRVLEVIRLYISRAPADVQLELF 760
            .....||..:| :.::||||||.|||:|.| |....||: .|:.|||.|:.|::...:.:.....
  Rat   671 TKGCEAEADRAEVSRFAKNFLPILFNLYGQ-PVAAGEAEAPRRAVLETIKTYLTITESQLVNGFL 734

  Fly   761 ENAQEQLAASALASFEYDAFFDINAAIVRVQTCKGIKAYFDKYMAPILRNDKSKLVAKDEQKLKK 825
            |.|.|::...|.:.|...:..|:..|:........|...:.. :.|.|           |.|:..
  Rat   735 EKATEKVLDPASSDFTRLSVLDLVVALAPYSDEAAISKLYST-IRPYL-----------ESKVHG 787

  Fly   826 QQRKTYELLRELMTSELPSCQKFTRKNSIVLQQILLDSFNTSCNVCQASRLHCLKSLIDCHSNLA 890
            .|:|.|.:|.|:..|......:|.:.:...|::.||||..::.:..:..||.||..::...|  |
  Rat   788 VQKKAYRVLEEVCASSQGPAARFVQSHLDDLKKTLLDSLQSTSSPAKRPRLKCLIHIVKKLS--A 850

  Fly   891 YNDQLVMKAIPEAVLNYKEFSNYKEQVAEQLIKSITQ--LYHDAGK---INDFVDILTAGFAGDE 950
            .:::.:...|||.:|..||.|....:.|..|:..:..  |..|:.:   :..::.::..|..|..
  Rat   851 EHEEFIAALIPEVILCTKEVSVGARKNAFTLLVEMGHAFLRFDSSQEEALQRYLVLIYPGLLGAV 915

  Fly   951 MLVTNTILAFRAVLQQQGEHLTVATLEFVLQQVSVFLVQKSRKQAEAAIAFLITFIKVMPIPLVA 1015
            ..|:.:|||...:|.:....:..:|:|.:|:.|.:.|..::|...::|:.|:...:.||.:..:|
  Rat   916 TTVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVVKSALGFIKVAVVVMDVVHLA 980

  Fly  1016 NHLEAIMRSLSAMTKDTKRYCRIQIGYLLKKLCIRFSPGELAGFVPGDDDVIHRRLKMIRK-RTR 1079
            .|::.::.::..::.|.:|:.|:::..|..|...:|....:...:|.:   .|:.|..||| .||
  Rat   981 KHVQLVLEAIGKLSDDMRRHFRMKLRNLFIKFIRKFGFELVKDLLPAE---YHKVLVNIRKAETR 1042

  Fly  1080 RDLRKKQNLEAQEDSSDDELVSGLQEKSYTIDDMLADSDSDLPEDMDAKDEAGAAAAASKRSKNA 1144
            ....:..:..|.|:..::|....:|.|..:|:::||||     ||.|.::|   .:...::.|.|
  Rat  1043 AKKHRALSQAAMEEEEEEEEEKPVQSKGDSIEEILADS-----EDEDEEEE---RSQGKEQRKLA 1099

  Fly  1145 KQQKSTYIRE-DPDEIVDLADLKSIGNVLTSGSAQTATPAQSQKTKAQLPNGGFKTADDGRLII- 1207
            :|:...:::| ..||.::..|.|....||    |....|.:.:|     .:.|||.:.|||||| 
  Rat  1100 RQRSRAWLKEGGGDEPLNFLDPKVAHRVL----ATQPGPGRGKK-----KDHGFKLSADGRLIIR 1155

  Fly  1208 ----SDKALRGQ--GGNDQSDDDSDSDASMAYGTVAKQPKVKRGMEDDSSDEDKLQQKLVPKRVR 1266
                .||.....  .|.|:...|...|||     |..:.|:||..||   :||:|:   :|    
  Rat  1156 EEEDGDKVEEEDVTKGEDEEMTDVMEDAS-----VRSKKKLKRQRED---EEDELE---IP---- 1205

  Fly  1267 KGDDAMSMKSGKTTASSRYTAGGKGIHRQLTAGNSDAMSVKSGKSTSRPAGSEYGSKKAKGDMKK 1331
                            .||.|||.||||.:              :.....|:||.:||||||:|:
  Rat  1206 ----------------PRYQAGGSGIHRPV--------------AKKAAPGAEYKAKKAKGDVKR 1240

  Fly  1332 SGKLDPYAYIPLTRNNLNKRKRSMNSRKFKSVLRGAGAENGGAGGGRVSKK 1382
            .|:||||||:||.|..||:||:.....:||.:::  .|:.|...|.::.:|
  Rat  1241 KGRLDPYAYVPLNRTKLNRRKKVKLQGQFKGLVK--AAQRGSQVGHKLHRK 1289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2691NP_001285218.1 NUC173 504..696 CDD:285386 62/195 (32%)
Rrp12XP_003749166.1 NUC173 473..670 CDD:285386 62/196 (32%)
SPT6_acidic 1156..>1203 CDD:291306 16/54 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337305
Domainoid 1 1.000 278 1.000 Domainoid score I1640
eggNOG 1 0.900 - - E1_KOG1248
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22370
Inparanoid 1 1.050 564 1.000 Inparanoid score I1036
OMA 1 1.010 - - QHG55423
OrthoDB 1 1.010 - - D48729at33208
OrthoFinder 1 1.000 - - FOG0003758
OrthoInspector 1 1.000 - - oto97573
orthoMCL 1 0.900 - - OOG6_103654
Panther 1 1.100 - - LDO PTHR21576
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.810

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