DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2691 and rrp12

DIOPT Version :9

Sequence 1:NP_001285218.1 Gene:CG2691 / 32320 FlyBaseID:FBgn0030504 Length:1384 Species:Drosophila melanogaster
Sequence 2:NP_001075884.1 Gene:rrp12 / 447949 XenbaseID:XB-GENE-993600 Length:1290 Species:Xenopus tropicalis


Alignment Length:1398 Identity:400/1398 - (28%)
Similarity:687/1398 - (49%) Gaps:148/1398 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GKFRSKLKRNGKGKTWSRGESATSNPTQMKHRMKAKSRFFQPNLSLAAATTTGLTMEAVHKHEQS 66
            ||.||  ...||.|.|.:|.|:.|||...:||..|:||||.     ..:..:.||::|:..|...
 Frog     5 GKLRS--GSAGKSKRWKKGHSSDSNPELRRHREAARSRFFS-----RPSGKSDLTVDALKLHNDL 62

  Fly    67 QAFNAETTTVNDVAGSLRSFKLDDDDDGMSGSGTAPTGTAPTGTIKTFQTFASNYSGCSNTCFQK 131
            |   ::|.:|.....:......|:|:..:              |.|:..:|.|..|.|:|..|.|
 Frog    63 Q---SDTLSVQKKLENSEGLMEDEDEMAI--------------TEKSGVSFLSGLSDCTNLTFGK 110

  Fly   132 LVTSFRSSSALHKEMLAILSALTEIIRENGGGESSTEYFLLLMEQIEAATEERDIVAGVTLLAMG 196
            :...:.|:||.|||:.|:|:|:||:||..||.||.||||..||..:||......:.|...||.:.
 Frog   111 VQRYWESNSAAHKEICAVLAAVTEVIRSQGGKESETEYFAALMTTLEAVESPESLAAVTYLLNLV 175

  Fly   197 INSVPAPVLKKRFAQTADTMQRLLQRFMESTNQSVIRHVIGCLSVILRAQDYAAWSYSSTFQYFD 261
            :..||.|||.|:|:.|:..:..::.....|.:.|.:|.::.||:|:||.||...|||.||.|.:.
 Frog   176 LKRVPGPVLIKKFSDTSKALMDIMASQASSGSTSAMRWIVSCLAVLLRKQDLLTWSYPSTLQVYH 240

  Fly   262 AILAFSIHSQPKIRKAAQHAIALIIHGSCFMLPAIKSDDNEMDEAVEQPKVKHHPASSRVAKFCL 326
            .:|:|::|::||||||||..:..|:.||.||.              .:...|||||....||||:
 Frog   241 GLLSFTVHAKPKIRKAAQLGVCSILKGSEFMF--------------SESAPKHHPAVQTTAKFCI 291

  Fly   327 AQFKPEVLANAQTTVLHTLELLKDTLYGFKTEDIRSVCEHLLSIMTAANVLVRTNCFQTLYSLFL 391
            .:.:....:...||.||.|.|||:.|..|....::|.||.||.:||.:|||:.....|..:.|| 
 Frog   292 QEIEKSGGSKEATTTLHMLTLLKELLPCFPVSMVKSCCETLLKVMTLSNVLITACAMQAFHGLF- 355

  Fly   392 KKSPN---LNASLCAKLLAAIHEYRPDKSDIRQTIAWVTVLKEGHLHLATMQLDLCMQALPRLID 453
            ...|.   |.|.|.|:::.|:::|.|:::|::..:||:.|:::.|.:||.:|.:||:..||||. 
 Frog   356 HSCPGTSALTAELNAQIITALYDYLPNENDLQPVLAWLAVMEKAHTNLARLQSELCLGHLPRLF- 419

  Fly   454 VCTTDLWLSDQKELVAGVSNCIKELLQDCVSRACATAEDAQCNRQS-----VSRIIASLHKMLNA 513
            :.|.:..||...::|...:..:|.||.:|::...|..........|     :.::...:.:.|:.
 Frog   420 LTTMNCLLSPHLQVVGAAARTLKTLLTECIAPNAADIGSVPLAPTSGPAGLICKMFRCVEEGLSY 484

  Fly   514 PFGEISRFVILIFSFVFEACGKLFGSELTPPLMTICK-RYDTQSAHRLQIEHTVISAIKALGPEL 577
            .|.....:|:.:....|||.||.....:...|.|:.. |.....::..:::|.|.:|::::|||:
 Frog   485 KFHSSWPYVLQVLQTFFEAAGKNCHPFMRKCLQTLADLRTSAHFSYTGELDHAVGAAVESMGPEV 549

  Fly   578 VLTAIPL-ADG-KGVMQLERSWLLPLLREGANGASLQFFKEKIVALAMDCQLKWKEFAEAKNNSS 640
            ||.|||| .|| :......||||:|::|:......|.||.:..:.||...:.:..:.::...|..
 Frog   550 VLKAIPLQIDGTEESCDFPRSWLVPVIRDNVKNTELGFFTKYFLPLAAKLKNRAADLSQDGRNLE 614

  Fly   641 SHIYELLCCQLWGLFPGFCRQPRD-PEYLRYLAPTLGAAVEKNPEFRPPIYDGLMELLGDNQSAE 704
            :.||:.|..|:|.:.||||.:|.| .:..:.:|.|||.|:...|:.|..:...|..|:.....:|
 Frog   615 AKIYDTLQWQIWTMLPGFCTKPTDVVDSFKGIARTLGMAINDRPDLRLTVCQALRSLINKGCESE 679

  Fly   705 CHQA-IGQYAKNFLPRLFNIYTQKPNGTYEADQRKRVLEVIRLYISRAPADVQLELFENAQEQLA 768
            ..:| :.::||||||.|||:|:|.|.......|:..||:.::.|::.....:.....:.|..:|.
 Frog   680 ADKAEVSRFAKNFLPILFNVYSQPPAPGEGPSQKLPVLDTVKAYLTITDQQMVSGFLDKATVKLT 744

  Fly   769 ASALASFEYDAFFDINAAIVRVQTCKGIKAYFDKYMAPILRNDKSKLVAKDEQKLKKQQRKTYEL 833
            .:..|........|:..|:.         .|.|:   |.:......::...|.|....|:|.|.:
 Frog   745 EAESAEPTRLYMLDLIIAMA---------PYADE---PSMTKIYHTILPYLEDKNHSLQKKAYRV 797

  Fly   834 LRELMTSELPSCQKFTRKNSIVLQQILLDSFNTSCNVCQASRLHCLKSLIDCHSNLAYNDQLVMK 898
            |.|:...|.|.|::|...|...|::.||.|..::.:..:..||.||..::  ....|.:::.:..
 Frog   798 LEEICGGEQPPCKEFVNNNLEELKKTLLTSLKSASSPAKRPRLKCLIHIV--KQLAADHEEFITS 860

  Fly   899 AIPEAVLNYKEFSNYKEQVAEQLIKSITQLY----HDAGK-INDFVDILTAGFAGDEMLVTNTIL 958
            .|||.::..:|.|....:.|..|:..|...:    ||..: :..::.::.||..|...:::..:|
 Frog   861 LIPEVMICTREVSVGARKNAYTLLAEIGYAFLRFNHDQKEAMEQYLAVVYAGLTGSVTMISCAVL 925

  Fly   959 AFRAVLQQQGEHLTVATLEFVLQQVSVFLVQKSRKQAEAAIAFLITFIKVMPIPLVANHLEAIMR 1023
            ....:|.:..:.:.:..:|.:|:.|.:.|..::|:..:||:.|:...|.:|.|.:::..|:.:|.
 Frog   926 TLTRLLFEFKDQMGLQVIEHLLENVCLLLGSRTREVVKAALGFIKVIIFIMDIKVLSKQLQMMME 990

  Fly  1024 SLSAMTKDTKRYCRIQIGYLLKKLCIRFSPGELAGFVPGDDDVIHRRLKMIRKRTRRDLRKKQNL 1088
            ::..:..|.:|:.|:::..:..|...:|....:...:|   :..|:.|..|||...|:.::|...
 Frog   991 AIGNINSDMRRFFRVKLKNIFTKFIRKFGFELVKSMLP---EAYHKVLVNIRKAEARNKKQKALK 1052

  Fly  1089 EA----QEDSSDDELVSGLQEKSYTIDDMLADSDSDLPEDMDAKDEAGAAAAASKRSKNAKQQKS 1149
            :|    :||..:.:.:.|     .:::|:|||||.::.||.:        ....::.|.|:|:..
 Frog  1053 QAAAVGEEDDQETKKLEG-----NSMEDILADSDEEVEEDEE--------KPTKQQKKLARQKSQ 1104

  Fly  1150 TYIRE-DPDEIVDLADLKSIGNVLTSGSAQTATPAQSQKTKAQLPNGGFKTADDGRLIISDKALR 1213
            .:::| :.|:.::..|.|:...||       ||....:.||.:   ..|||:.||||||.|..:.
 Frog  1105 AWLKEGEEDDPLNFLDPKAAQRVL-------ATRPDGKSTKLK---HDFKTSSDGRLIIQDDEVE 1159

  Fly  1214 GQGGNDQSD--DDSDSDASMAYGTVAKQPKVKRGMEDDSSDEDKLQQKLVPKRVRKGDDAMSMKS 1276
                .|:|.  |:..:|.....|..:|:.:.||..||:..|:|...:|                 
 Frog  1160 ----EDKSKAVDEEMADLMQEVGIRSKKAQKKRFREDNDDDDDATDKK----------------- 1203

  Fly  1277 GKTTASSRYTAGGKGIHRQLTAGNSDAMSVKSGKSTSRPAGSEYGSKKAKGDMKKSGKLDPYAYI 1341
                  .:|.:||.||||.:              |....:|:.|.|||.|||:|:.||.||:|||
 Frog  1204 ------PQYKSGGSGIHRPI--------------SKKPESGANYKSKKGKGDVKQKGKHDPFAYI 1248

  Fly  1342 PLTRNNLNKRKRSMNSRKFKSVLRGA--GAENG 1372
            ||.:..||:||::....:||.::|.|  ||::|
 Frog  1249 PLNKATLNRRKKAKMQGQFKGLVRAAQRGAQSG 1281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2691NP_001285218.1 NUC173 504..696 CDD:285386 56/195 (29%)
rrp12NP_001075884.1 NUC173 475..672 CDD:285386 56/196 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 284 1.000 Domainoid score I1605
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H22370
Inparanoid 1 1.050 566 1.000 Inparanoid score I1064
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D48729at33208
OrthoFinder 1 1.000 - - FOG0003758
OrthoInspector 1 1.000 - - oto104265
Panther 1 1.100 - - LDO PTHR21576
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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