DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXD3 and ftz

DIOPT Version :9

Sequence 1:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:408 Identity:117/408 - (28%)
Similarity:150/408 - (36%) Gaps:133/408 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    21 AYYENPGLFGGY----GYSK-----------TTDTYGYSTPHQP-YPPPAAASSLDTDYPGSACS 69
            |||:|...:.||    .||:           ||.|.   .|.|| .|||.|......|...|..:
  Fly    39 AYYQNTSNYQGYYPQESYSESCYYYNNQEQVTTQTV---PPVQPTTPPPKATKRKAEDDAASIIA 100

Human    70 IQSSAP--LRA------------PAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPP 120
            .....|  |||            |.:....:......|......   ..|..|..:.|......|
  Fly   101 AVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKV---TASPAPSYDQEYVTVPTP 162

Human   121 ---------------------------PPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISK 158
                                       .||||.|.|.|...|...|.:.| |..::|:.|..|:.
  Fly   163 SASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQSP-GEKSSSAVSQEINH 226

Human   159 QI---------FPW--MKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKE 212
            :|         |.|  ::|            |....|:|       |||.|..||..|.:|||||
  Fly   227 RIVTAPNGAGDFNWSHIEE------------TLASDCKD-------SKRTRQTYTRYQTLELEKE 272

Human   213 FHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAA 277
            ||||||:.|.||:::||.|:|:||||||||||||||.|||:        ....|||..    || 
  Fly   273 FHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDR--------TLDSSPEHC----GA- 324

Human   278 GHVAYSGQLPPVPGL------AYDAPSP-----------PAFAKSQPNMYGL-----AAYTAPLS 320
               .|:..|||:...      |...|.|           ||::.|..:.|||     ...|....
  Fly   325 ---GYTAMLPPLEATSTATTGAPSVPVPMYHHHQTTAAYPAYSHSHSHGYGLLNDYPQQQTHQQY 386

Human   321 SCLPQQKRYAAPEFEPHP 338
            ...|||.::.. .::.||
  Fly   387 DAYPQQYQHQC-SYQQHP 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 33/180 (18%)
Antp-type hexapeptide 160..165 3/15 (20%)
Homeobox 198..250 CDD:306543 36/51 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 5/26 (19%)
DUF4074 369..430 CDD:315871
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
ftzNP_477498.1 FTZ 1..248 CDD:281812 49/227 (22%)
Homeobox 257..310 CDD:278475 36/52 (69%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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