DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXD3 and unpg

DIOPT Version :9

Sequence 1:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:512 Identity:115/512 - (22%)
Similarity:161/512 - (31%) Gaps:209/512 - (40%)


- Green bases have known domain annotations that are detailed below.


Human    17 MQKAAYYENPGLFGGYGYSKTTDTYGYSTPHQPYPPPAAASSLDTDY-PGSA------------- 67
            |::.|..:|    |..|..::..|   ....:|:|.|.:..||..:. |.:|             
  Fly     1 MERPALLQN----GEIGTMESPTT---RLASKPFPKPFSIESLIANQTPATATPPSPPEERDQEQ 58

Human    68 -----------CSIQSSA------PLRAPAHKG--AE--------LNGSCMRPGTGNSQGGGGGS 105
                       ..:.|||      ||..|...|  |:        :.|.|..|   :|..|...:
  Fly    59 EAEQEQELSARAMVASSALGLTQFPLYNPWLHGYFAQNHERLTHLIAGGCYLP---SSPAGHPAA 120

Human   106 QPPGLNSEQQPPQPPPP--------PPTLP--------PSSP----------------------- 131
            |.|...::.|||.|.||        |||||        |.:|                       
  Fly   121 QQPQAQAQPQPPPPHPPTHALEKQLPPTLPHPLDTRFLPFNPAAAGVAPTDLSYRRLAELMNQDY 185

Human   132 -----------------------TNPG------------GGVPAKKPK----------------- 144
                                   .|||            ...|||...                 
  Fly   186 VHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKSGSHSPMEPALDVGMDEDFE 250

Human   145 -GGPNASSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDK--------------------- 187
             .|.:.|..|.|:|.:.:....:..:|....||   ..|.|.|.                     
  Fly   251 CSGDSCSDISLTMSPRNYNGEMDKSRNGAYTNS---DSEDCSDDEGAQSRHEGGGMGGKDSQGNG 312

Human   188 SPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD 252
            |.....|:|.|||:||.||:|||:|||..:||....|.::|..|.|:|.|:||||||||.|:|  
  Fly   313 SSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWK-- 375

Human   253 QKAKGILHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGLAYDAPSPPAFAKSQPNMYGLAAYTA 317
             :.|..|.|...          |..|..:.:..:.|:|              ...|.:.:.:...
  Fly   376 -RVKAGLTSHGL----------GRNGTTSGTKIVVPIP--------------VHVNRFAVRSQHQ 415

Human   318 PLSS-CLPQQKRYAAPEFEPHPMASNGGGFASANLQGSPVYVGGNFVESMAPASGPV 373
            .|.. ||...|    |:......|...|||  ....||        ..:.:|:.|||
  Fly   416 QLEKMCLSGPK----PDLRKKLSAEAIGGF--EKFSGS--------TNASSPSGGPV 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62 5/18 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 47/257 (18%)
Antp-type hexapeptide 160..165 0/4 (0%)
Homeobox 198..250 CDD:306543 30/51 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 5/26 (19%)
DUF4074 369..430 CDD:315871 3/5 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
unpgNP_477146.1 Homeobox 324..375 CDD:278475 29/50 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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