DRSC/TRiP Functional Genomics Resources

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Protein Alignment tth and RSF1

DIOPT Version :9

Sequence 1:NP_001285216.1 Gene:tth / 32318 FlyBaseID:FBgn0030502 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_057662.3 Gene:RSF1 / 51773 HGNCID:18118 Length:1441 Species:Homo sapiens


Alignment Length:358 Identity:72/358 - (20%)
Similarity:115/358 - (32%) Gaps:113/358 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LCSERRHRLPFLDPQTGVAQNHSQLFLDKRQRM---------------PGFRQGQIYTYPAARWR 90
            ||.:...:|..||    ||....:....:::|:               |.|.:.|......::..
Human   943 LCEKLEEQLQDLD----VALKKKERAERRKERLVYVGISIENIIPPQEPDFSEDQEEKKKDSKKS 1003

  Fly    91 KSR---------RQYLSKMYSRFPERPFQALRKEHEALVASGVNLG--LSSLTSGVGSMPGS--- 141
            |:.         |:.:|..:..|.|...:|:..:.:.....||..|  :|::|...|....:   
Human  1004 KANLLERRSTRTRKCISYRFDEFDEAIDEAIEDDIKEADGGGVGRGKDISTITGHRGKDISTILD 1068

  Fly   142 -----------------------NSLASSSSLTLN------MLTGGGAAPAVLGSLHSDTAHDFN 177
                                   |.|.|.|:|...      .::.|.....|:.        |.|
Human  1069 EERKENKRPQRAAAARRKKRRRLNDLDSDSNLDEEESEDEFKISDGSQDEFVVS--------DEN 1125

  Fly   178 GAFSLEESSSLGAAGGDTSDSK--DSQQQQHQQHQHQQQAVKEELLPKEWFYDDMDMNDVDSLEE 240
            ...|.|:..|     .|.||:.  ..:.::|.....:|........||:.:.||      |..||
Human  1126 PDESEEDPPS-----NDDSDTDFCSRRLRRHPSRPMRQSRRLRRKTPKKKYSDD------DEEEE 1179

  Fly   241 -PKSPADDEYDYDPRYGN-----KKRRKRRPGKR----GGDSGGGGGGGGAGGGGNSGGSSSSRR 295
             .::..|.|.|:...:.:     ::||.||..||    ..||             .|.||..|.|
Human  1180 SEENSRDSESDFSDDFSDDFVETRRRRSRRNQKRQINYKEDS-------------ESDGSQKSLR 1231

  Fly   296 RSAAARSRITTTDAALDASLEAIESGESVPGSN 328
            |....| |:.      ...|.:.||.||....|
Human  1232 RGKEIR-RVH------KRRLSSSESEESYLSKN 1257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tthNP_001285216.1 Requiem_N 24..94 CDD:290758 12/76 (16%)
RSF1NP_057662.3 WHIM1 98..148 CDD:292246
WHIM2 150..182 CDD:292247
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..283
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..385
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 467..634
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 675..887
PHD_RSF1 893..938 CDD:277018
BAH 915..>968 CDD:295389 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 983..1007 4/23 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1063..1428 49/234 (21%)
CDC45 1093..>1171 CDD:280821 18/90 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156491
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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