DRSC/TRiP Functional Genomics Resources

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Protein Alignment tth and d4

DIOPT Version :10

Sequence 1:NP_572904.1 Gene:tth / 32318 FlyBaseID:FBgn0030502 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_610163.1 Gene:d4 / 35485 FlyBaseID:FBgn0033015 Length:497 Species:Drosophila melanogaster


Alignment Length:388 Identity:124/388 - (31%)
Similarity:175/388 - (45%) Gaps:102/388 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVSMPNLAKIESFLKD-VSYRETIEYSANFNTRLCSERRHRLPFLDPQTGVAQNHSQLFLDKRQR 72
            :|::.|..||::||.| ..|:|.:|.|.|||||||.|||.|:|||||||||||.|..||:.|:||
  Fly    12 VVNIANFEKIQNFLNDKEKYKEILENSENFNTRLCIERRLRMPFLDPQTGVAQTHCSLFMKKKQR 76

  Fly    73 MPGFRQGQIYTYPAARWRKSRRQYLSKMYSRFPERPFQALR--------------KEHEALVASG 123
            |||.|.|||||||::||||.:||||..     |.:.|:|.:              :.|..:.:||
  Fly    77 MPGLRHGQIYTYPSSRWRKPKRQYLLN-----PNQSFRAYQYREHNLQHSHHQTHQHHHHIPSSG 136

  Fly   124 VNLGLSSLTSGVGSMPGSNSLASSSSLTLNMLTGGGAAPAVLGSLHSDTAHDFNGAFSLEESSSL 188
            |            ::|.:..||.|:                              |.:..:.:|:
  Fly   137 V------------AVPQNPHLAESA------------------------------AIAATDGNSM 159

  Fly   189 GAAGGDTSDSKDSQQQQHQQHQHQQQAVKEELLPKEWFYDDMDMNDVDSLEEPKSPADDEYDYDP 253
            ||:|  .:|||||...                :.||||:|:||.:.....:|.:...|.:.|:|.
  Fly   160 GASG--DNDSKDSHAN----------------VEKEWFHDEMDTSHFHHGDEFEDDFDSDNDFDE 206

  Fly   254 RYGNKKRRKR--RP----------GKRGGDSGGGGGGGGAGG--------GGNSGGSSSSRRRSA 298
            .|.::.:||:  ||          .|||...||........|        ||||..:|::...:|
  Fly   207 SYTSRGKRKKCSRPRRTNANVEGTPKRGRKGGGNRRKNAVEGESDRKRRAGGNSANTSAAAAAAA 271

  Fly   299 AARSRITTTDAAL-DASLEAIESGESVP-GSNGGPISSGGILSGSLGAGLAGVSGSGGGGGAS 359
            ||.:....|.||: ...|.|..|..:.| ..|.....||.||..::.:.....|...|....|
  Fly   272 AAVAHAACTAAAVASTGLYASHSNSASPIPINDDNSQSGLILPTNISSSYDKTSSDAGASNDS 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tthNP_572904.1 DPF1-3_N 24..89 CDD:464074 44/65 (68%)
d4NP_610163.1 DPF1-3_N 31..93 CDD:464074 43/61 (70%)
PHD1_d4 387..442 CDD:277091
PHD2_d4 444..489 CDD:277005
Blue background indicates that the domain is not in the aligned region.

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