DRSC/TRiP Functional Genomics Resources

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Protein Alignment up and tnt-2

DIOPT Version :9

Sequence 1:NP_001162742.1 Gene:up / 32314 FlyBaseID:FBgn0004169 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001024703.1 Gene:tnt-2 / 181119 WormBaseID:WBGene00006587 Length:428 Species:Caenorhabditis elegans


Alignment Length:439 Identity:143/439 - (32%)
Similarity:213/439 - (48%) Gaps:88/439 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDDEEYTSSEEEEVVEET----------------REETKP--------------PQTPAEGEGD 35
            |||:||..|.||||.|||:                .||.:|              |:.|.:.|..
 Worm     1 MSDEEEVLSGEEEEEVEESLAEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKP 65

  Fly    36 PEFIKRQD------QKRSDLDDQLKEYITEWRKQRSKE--EDELKKLKEKQAKRKVTRAEEEQKM 92
            |..:...:      :||.:.::..|....|.|:...||  |.||::|||||.||:..|.|:|::.
 Worm    66 PAEMTEAEAAMLAAKKRHEEEEAAKLLDYEQRRVLEKEQMEQELRELKEKQEKRRAEREEDERQF 130

  Fly    93 AQRKKEEEERRVREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGP---NFTIAKKD-- 152
            |:|::::||||.::.|::|.:...||..:.||..:::|.|..:........|   |||::.|.  
 Worm   131 AERRRQDEERRRKDEEDRKAKADAEKARKNEEKSRRQQMMAGSFAGAAVGAPGGKNFTVSNKGDQ 195

  Fly   153 -AGVLGLSSAAMERNKTKEQLEEEKKISLSFRIKPLAIEGFGEAKLREKAQELWELIVKLETEKY 216
             |....|:..|.....||||.|:.|:..|:...|...:.......|:|:.:.:...|||||.|||
 Worm   196 AANFGNLAQGAKAEGLTKEQQEDAKRAFLNVVCKAQDVSTLMPNDLKERIKGIHARIVKLEGEKY 260

  Fly   217 DLEERQKRQDYDLKELKERQKQQLRHKALKKGLDP-EALTGKYPPKIQVASKYERRVDTRSYDDK 280
            |||:|::||:||||||.|||:|..|:||||||||| ||.:..:||||..|||::|:.|.|||.|:
 Worm   261 DLEKRRERQEYDLKELNERQRQVARNKALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSYGDR 325

  Fly   281 KKLFEG-----GYNTVYAETLEKT-WQERQERFTQRTKSKLPKWFGERPGKKAGEPETPEGEEDA 339
            :.|||.     .|..|:..:.... |..::....::.:..|               |.|:..|..
 Worm   326 RYLFENPFVKPAYTLVHGTSRPPAEWGRKENEELEQIRKNL---------------EPPKYVEQV 375

  Fly   340 KADEDIVE----------DDEEVEE------------EVVEEEDEEAEE 366
            ||:.|..:          .|:|.|:            |||..:.|.|.|
 Worm   376 KAEGDAAKPPVNPIPLQVPDKEFEDGPVQSQNPNEGAEVVIPDSEAAAE 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
upNP_001162742.1 Troponin 156..>233 CDD:395788 31/76 (41%)
tnt-2NP_001024703.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 193 1.000 Inparanoid score I2538
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29043
OrthoDB 1 1.010 - - D1193086at2759
OrthoFinder 1 1.000 - - FOG0009999
OrthoInspector 1 1.000 - - otm14538
orthoMCL 1 0.900 - - OOG6_109409
Panther 1 1.100 - - O PTHR11521
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.980

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