DRSC/TRiP Functional Genomics Resources

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Protein Alignment up and tnt-3

DIOPT Version :9

Sequence 1:NP_001162742.1 Gene:up / 32314 FlyBaseID:FBgn0004169 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001360657.1 Gene:tnt-3 / 181052 WormBaseID:WBGene00006588 Length:1235 Species:Caenorhabditis elegans


Alignment Length:316 Identity:129/316 - (40%)
Similarity:184/316 - (58%) Gaps:36/316 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DEEYTSSEEEEV--------VEETREE-------TKPPQTPAEGEGDPEFIKRQDQKRSDLDDQL 53
            |||....:||||        .:.||.:       |:..:...|||......||:.::....  :|
 Worm   863 DEEVEEVDEEEVEADYAPSETDTTRSDRPKTKSFTEDEEGLTEGERAMAAAKRRHEEEQHA--KL 925

  Fly    54 KEYITEWRKQRSKEEDELKKLKEKQAKRKVTRAEEEQKMAQRKKEEEERRVREAEEKKQREIEEK 118
            ::|....|.:|.|||:|||||||||.|||:.|.:||::|.:|::..::||.:|.||:|.:..:::
 Worm   926 QDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEMEERRRAADDRRRQEEEERKAKVDQDR 990

  Fly   119 RMRLEEAEKKRQAMLQAMKDKDKKGPNFTIAKKDA-----GVLGLSSAAMERNKTKEQLEEEKKI 178
            |.|.||..||.|  |...:...:.|.|||:|||.|     |  .:..|..|...||||.|:.|:.
 Worm   991 RNREEEKNKKNQ--LSGFQTGGQGGRNFTVAKKAAQNDKFG--NIVQAKQEMGMTKEQQEDAKRA 1051

  Fly   179 SLSFRIK--PLAIEGFGEAKLREKAQELWELIVKLETEKYDLEERQKRQDYDLKELKERQKQQLR 241
            .|:...|  |.|.| ..:::|:.|.:||.:.|.||||||||||:|.:||:||:|||.|||:|..|
 Worm  1052 FLAAIRKEIPNASE-VPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNERQRQVTR 1115

  Fly   242 HKALKKGLDP-EALTGKYPPKIQVASKYER-RVDTRSYDDKKKLFEGGYNTVYAET 295
            :.|||||:|| |....:||||..:|||:|| ||.|  :.|::.||.   ||...:|
 Worm  1116 NSALKKGIDPAEVGNTRYPPKQLIASKFERQRVQT--FSDRRALFT---NTKKLDT 1166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
upNP_001162742.1 Troponin 156..>233 CDD:395788 35/78 (45%)
tnt-3NP_001360657.1 Troponin 1033..>1107 CDD:366404 35/74 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158713
Domainoid 1 1.000 61 1.000 Domainoid score I6962
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1193086at2759
OrthoFinder 1 1.000 - - FOG0009999
OrthoInspector 1 1.000 - - otm14538
orthoMCL 1 0.900 - - OOG6_109409
Panther 1 1.100 - - O PTHR11521
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.850

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