DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment up and mup-2

DIOPT Version :9

Sequence 1:NP_001162742.1 Gene:up / 32314 FlyBaseID:FBgn0004169 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_509076.1 Gene:mup-2 / 180914 WormBaseID:WBGene00003495 Length:405 Species:Caenorhabditis elegans


Alignment Length:407 Identity:144/407 - (35%)
Similarity:212/407 - (52%) Gaps:50/407 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDDEEYTSSE--EEEVVEETRE-------------------ETKPPQTPAEGEGDP------EF 38
            |||:||..|.|  |||.||||.|                   |.|..:.|.:.|..|      |.
 Worm     1 MSDEEEVYSDEEVEEEEVEETEEAPAEAEEPEETTEEVVAPPEVKERRAPVQEEKPPAEMTEAEI 65

  Fly    39 IKRQDQKRSDLDDQLKEYITEWRKQRSKE--EDELKKLKEKQAKRKVTRAEEEQKMAQRKKEEEE 101
            .....:||.:.::..|....|.|:...||  |.||::|||||.||:..|.|:|::.|:|:::::|
 Worm    66 AMLAAKKRHEEEEAAKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQFAERRRQDDE 130

  Fly   102 RRVREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGP--NFTIAKKDAGVLGLSSAAME 164
            ||.:|.:|:|.:...||..:.||..:::|.|..|...:.:.|.  |||:|.|........:.|..
 Worm   131 RRRKEEDERKAKADAEKIRKNEEKVRRQQMMAGAFNGRVEAGAGRNFTVASKGDQAAQFGNLAQA 195

  Fly   165 RN----KTKEQLEEEKKISLSFRIKPLAIEGFGEAKLREKAQELWELIVKLETEKYDLEERQKRQ 225
            :.    .:|||:|:.|:..|:...:...:.|.....|:|:.:.|...|||||.||||||:|::||
 Worm   196 KGGKDVMSKEQMEDAKRNFLAAVCRVQDVSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQ 260

  Fly   226 DYDLKELKERQKQQLRHKALKKGLDP-EALTGKYPPKIQVASKYERRVDTRSYDDKKKLFEGGYN 289
            |||:|||.|||:|..|:||||||||| ||.:..:||||..|||::|:.|.|||.|::.|||....
 Worm   261 DYDMKELHERQRQAARNKALKKGLDPEEAASSVHPPKITTASKFDRQTDRRSYGDRRYLFENPEE 325

  Fly   290 TVYAETLEKT------WQERQERFTQRTKSKL--PKWFGERPGKKAGEPETP----EGEEDAKAD 342
            ...|..:..|      |..:|....::.:..|  ||:..:...:.|..|..|    ...:|.:..
 Worm   326 EKQASLVRGTGRPPAEWGRKQNEELEQIRKNLEPPKYVEQVKVEGARAPVEPVPLFVPTDDFEPQ 390

  Fly   343 EDIVEDDEEVEEEVVEE 359
            :  |.:|..|.||||.|
 Worm   391 Q--VTEDPNVGEEVVVE 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
upNP_001162742.1 Troponin 156..>233 CDD:395788 30/80 (38%)
mup-2NP_509076.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3634
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 193 1.000 Inparanoid score I2538
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29043
OrthoDB 1 1.010 - - D1193086at2759
OrthoFinder 1 1.000 - - FOG0009999
OrthoInspector 1 1.000 - - otm14538
orthoMCL 1 0.900 - - OOG6_109409
Panther 1 1.100 - - O PTHR11521
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.880

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