DRSC/TRiP Functional Genomics Resources

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Protein Alignment up and tnt-4

DIOPT Version :10

Sequence 1:NP_525088.2 Gene:up / 32314 FlyBaseID:FBgn0004169 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001263832.1 Gene:tnt-4 / 178679 WormBaseID:WBGene00006589 Length:375 Species:Caenorhabditis elegans


Alignment Length:428 Identity:135/428 - (31%)
Similarity:208/428 - (48%) Gaps:111/428 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DEEYTSSEEEEVVEETREE-----------------------------TKPPQTPAE-------- 31
            ||||:..|:|||.||..||                             |..|.|||.        
 Worm     3 DEEYSEYEDEEVEEEEVEEVEEAEAEEEEDTEQQEEERFKRASVDTTATGGPATPAASSHAPVSF 67

  Fly    32 -----GEGDPEFIKRQDQKRSDLDDQLKEYITEWRKQRSKEEDELKKLKEKQAKRKVTRAEEEQK 91
                 .||:...:..:.:..:|...:|::|....|.:|.|||:||:|||||||:||:.|.:||::
 Worm    68 DGEALNEGEKAMLAAKRRHENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEERE 132

  Fly    92 MAQRKKEEEERRVREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPNFTIAKKD--AG 154
            .|:||:.:||||.:|.:|::.|..|||:.:.||..||.|.|......: :.|.||.|.||:  ||
 Worm   133 AAERKRLDEERRQKEEQERRARAEEEKKRKEEEKLKKAQMMGGGFPGQ-QGGRNFVIQKKEESAG 196

  Fly   155 V---LG-LSSAAMERNKTKEQLEEEKKISLSFRIKPLAIEGFGEAK------LREKAQELWELIV 209
            |   .| :..|..|...||||.||.|.::::...|.:|     ||.      ::.|.:||.:.|.
 Worm   197 VGDRFGNIVQAKQEMGMTKEQQEEAKSVAMAGIRKSIA-----EASTILPNDMKAKIKELHQRIC 256

  Fly   210 KLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKG-LDPEALTGKYPPKIQVASKYERRVD 273
            |||.:|||||:|.:||:||||||.||.:|..|....|.| :..:...|::|||:|::|||:|::|
 Worm   257 KLEAQKYDLEKRHERQEYDLKELNERSRQVARANNAKNGQVSGDDTGGRHPPKVQISSKYDRQID 321

  Fly   274 TRSYDDKKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEED 338
            .|::.::::::|                         .|...|.:.|..|               
 Worm   322 RRNFKERRQVYE-------------------------NKIAFPCFPGVAP--------------- 346

  Fly   339 AKADEDIVEDDEEVEEEVVEEEDEEAEEDEEEEEEEEE 376
                      ...:.|:|:::.|.|.:::.|..||||:
 Worm   347 ----------PPALYEKVIKKMDYEIQQELEAAEEEED 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
upNP_525088.2 Smc <39..>249 CDD:440809 91/222 (41%)
Troponin 156..>233 CDD:460018 34/83 (41%)
tnt-4NP_001263832.1 None

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