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Protein Alignment up and tnnt2
DIOPT Version :9
| Sequence 1: | NP_001162742.1 |
Gene: | up / 32314 |
FlyBaseID: | FBgn0004169 |
Length: | 397 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_012809815.1 |
Gene: | tnnt2 / 100493699 |
XenbaseID: | XB-GENE-482614 |
Length: | 279 |
Species: | Xenopus tropicalis |
| Alignment Length: | |
Identity: | / - (0%) |
| Similarity: | / - (0%) |
Gaps: | / - (0%) |
- Green bases have known domain annotations that are detailed below.
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| up | NP_001162742.1 |
Troponin |
156..>233 |
CDD:395788 |
|
| tnnt2 | XP_012809815.1 |
Troponin |
81..215 |
CDD:279349 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
1 |
1.000 |
- |
- |
|
|
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
1 |
1.050 |
110 |
1.000 |
Inparanoid score |
I4739 |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
otm48277 |
| Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR11521 |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 5.060 |
|
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