DRSC/TRiP Functional Genomics Resources

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Protein Alignment up and tnnt2

DIOPT Version :10

Sequence 1:NP_525088.2 Gene:up / 32314 FlyBaseID:FBgn0004169 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_012809815.1 Gene:tnnt2 / 100493699 XenbaseID:XB-GENE-482614 Length:279 Species:Xenopus tropicalis


Alignment Length:294 Identity:93/294 - (31%)
Similarity:140/294 - (47%) Gaps:66/294 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSD--------DEEYTSSEEEEVVEETREETKPPQTPAEGEGDPEF------------------I 39
            |||        :||...||.||..||..|:....:...|.||:.|.                  :
 Frog     1 MSDTEDIIEEYEEEDKVSENEEGEEEPEEDGNEEEANEEKEGENEEQEEESRPKPKLFMPNLIPL 65

  Fly    40 KRQDQKRSDLDD----QLKEYITEWR-------KQRSKEEDELKKLKEKQAKRKVTRAEEEQKMA 93
            |..|.::.|.||    ::::.:||.:       :.|.|||:||:.|.|:..||:..|||:   :.
 Frog    66 KIPDGEKVDFDDIHRKRMEKDLTELQTLIEVHFESRKKEEEELQALTERMEKRRAERAEQ---LR 127

  Fly    94 QRKKEEEERRVREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPNFTIAKKDAGVLGL 158
            .|.:.|:||:.|.|||:.::|.||.|.|.|:..:|::|              |:......|.|  
 Frog   128 IRNEREKERQARVAEERARKEEEENRKRAEDDVRKKKA--------------FSNMLHFGGYL-- 176

  Fly   159 SSAAMERNKTKEQLE-EEKKISLSFRIKPLAIEGFGEAKLREKAQELWELIVKLETEKYDLEERQ 222
              ...||...|:|.| |:||:.|:.|..||.|....|.|||.:||.|:..|.:||.||||.:...
 Frog   177 --QKTERKVGKKQTEREKKKMILTERKTPLNIGNMNEDKLRTEAQHLFNRIYELEAEKYDHQATF 239

  Fly   223 KRQDYDLKELKER--QKQQLRHKALK-----KGL 249
            |:|.|::..|:.|  ..|:|:.|:.|     ||:
 Frog   240 KKQKYEINVLRNRVSDHQKLKSKSSKGPRSGKGI 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
upNP_525088.2 Smc <39..>249 CDD:440809 76/228 (33%)
Troponin 156..>233 CDD:460018 31/77 (40%)
tnnt2XP_012809815.1 Troponin 81..215 CDD:460018 49/154 (32%)

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