DRSC/TRiP Functional Genomics Resources

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Protein Alignment up and tnnt3b

DIOPT Version :9

Sequence 1:NP_001162742.1 Gene:up / 32314 FlyBaseID:FBgn0004169 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001103886.1 Gene:tnnt3b / 100003572 ZFINID:ZDB-GENE-030520-2 Length:284 Species:Danio rerio


Alignment Length:305 Identity:90/305 - (29%)
Similarity:141/305 - (46%) Gaps:85/305 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDDEEYTSSE--------------------EEEVVEETREETKP-PQTPAEGEGDPE---FIKR 41
            |||.|:....|                    |:|.|.|...|.:| |:...|.|.:||   .:..
Zfish     1 MSDTEDVGVEEVVEVEVAPEAAPEPEPEPEPEQEPVPEPEPEPEPEPEKQPEPEPEPEPEQEVHE 65

  Fly    42 QDQK--------------RSDLDD-----------QLKEYITEWRKQRSKEEDELKKLKEKQAKR 81
            :::|              :.|.||           :|:..|....:.|.|||:||..||::..||
Zfish    66 EEEKPKFKPSAPKIPDGDKVDFDDIQKKRQNKDLVELQALIDAHFEHRKKEEEELIALKDRIEKR 130

  Fly    82 KVTRAEEEQKMAQRKKEEEERRVREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPNF 146
            :..|||:::..|::.||.:.||            ||:|:|.|||:.|::|      |:|      
Zfish   131 RSERAEQQRIRAEKDKERQARR------------EEERLRKEEADAKKRA------DED------ 171

  Fly   147 TIAKKDAGVLGLSS--------AAMERNKTKEQLEEEKKISLSFRIKPLAIEGFGEAKLREKAQE 203
              |||.:.:..:.|        |..:|...|:...|:||..|:.|.|||.|:...|.||||||:|
Zfish   172 --AKKKSALSNMGSQYSSYLQKADSKRGGKKQTEREKKKKILAERRKPLNIDHMNEDKLREKAKE 234

  Fly   204 LWELIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKG 248
            ||:.:..||.||::..|:.|||.|::...::|.::..::.  |||
Zfish   235 LWDWLYSLEAEKFEHMEKLKRQKYEVTTQRKRVEELSKYS--KKG 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
upNP_001162742.1 Troponin 156..>233 CDD:395788 32/84 (38%)
tnnt3bNP_001103886.1 Troponin 93..230 CDD:279349 50/162 (31%)
PhnG <96..137 CDD:294865 14/40 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592572
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 122 1.000 Inparanoid score I4719
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11521
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6876
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.020

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