DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXD1 and ftz

DIOPT Version :9

Sequence 1:NP_078777.1 Gene:HOXD1 / 3231 HGNCID:5132 Length:328 Species:Homo sapiens
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:377 Identity:93/377 - (24%)
Similarity:122/377 - (32%) Gaps:143/377 - (37%)


- Green bases have known domain annotations that are detailed below.


Human    34 PVALQPAFPLGNGDGAFV-----------------SCLPLAAARPSPSPPAAPARPSVPPPAA-- 79
            |.:|.|.:...:|..|:.                 ||..........:....|.:|:.|||.|  
  Fly    24 PHSLPPTYYDNSGSNAYYQNTSNYQGYYPQESYSESCYYYNNQEQVTTQTVPPVQPTTPPPKATK 88

Human    80 -----------------------------------PQYAQCTLEGAYE-PGAAPAAAAGGADYGF 108
                                               |.|...|:|...: |..:....|..|    
  Fly    89 RKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTASPA---- 149

Human   109 LGSGPAYDFPGVLGRAADDGGSHVHYATSAVFSGGGSFLLSGQVDYAAFGEPGPFPACLKASADG 173
                |:||               ..|.|....|.      |..|||.....|......||     
  Fly   150 ----PSYD---------------QEYVTVPTPSA------SEDVDYLDVYSPQSQTQKLK----- 184

Human   174 HPGAFQTASPAPGTYPKSVSPASGL--------------------------PAAFSTFEWMKVKR 212
             .|.|.|..|   |.|.|:.|..|:                          |.....|.|..::.
  Fly   185 -NGDFATPPP---TTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEE 245

Human   213 NASKKGKLAEYGAASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWF 277
            ..:...|        .|...|..::..|..|||||||||:|:||.|||:|||.|.|::.|:||||
  Fly   246 TLASDCK--------DSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWF 302

Human   278 QNRRMKQKK-------REREGLLATAIPVAPLQLPLSGTTPTKFIKNPGSPS 322
            ||||||.||       .|..|...||: :.||:...:.||        |:||
  Fly   303 QNRRMKSKKDRTLDSSPEHCGAGYTAM-LPPLEATSTATT--------GAPS 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXD1NP_078777.1 Antp-type hexapeptide 204..209 2/4 (50%)
Homeobox 233..285 CDD:278475 33/51 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..328 5/18 (28%)
ftzNP_477498.1 FTZ 1..248 CDD:281812 45/261 (17%)
Homeobox 257..310 CDD:278475 33/52 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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