DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpr12A and Lcp65Ag2

DIOPT Version :9

Sequence 1:NP_572896.1 Gene:Cpr12A / 32309 FlyBaseID:FBgn0030494 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_477272.1 Gene:Lcp65Ag2 / 38702 FlyBaseID:FBgn0020637 Length:105 Species:Drosophila melanogaster


Alignment Length:107 Identity:29/107 - (27%)
Similarity:48/107 - (44%) Gaps:22/107 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFAIFLLSATLISAQQIKESAPSAR--LLDRFDNRYPDGSYEYRFELDDGTARYERGYFVKINDV 70
            |||:.|             :||:|.  .:.|.::.....|::|.:|..||.|....|   ::||:
  Fly    10 LFAVAL-------------AAPAAEEPTIVRSESDVGPESFKYDWETSDGQAAQAVG---QLNDI 58

  Fly    71 KT----LMVVGYYAYRMTDGRYITVFYNADQFGYRQNQSITP 108
            .|    :.|.|.|.:...||:...|.|.||:.|::...:..|
  Fly    59 GTENEAISVSGSYRFIADDGQTYQVNYIADKNGFQPQGAHLP 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr12ANP_572896.1 Chitin_bind_4 46..100 CDD:278791 18/57 (32%)
Lcp65Ag2NP_477272.1 Chitin_bind_4 37..92 CDD:306811 18/57 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.