DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr12A and l(3)mbn

DIOPT Version :9

Sequence 1:NP_572896.1 Gene:Cpr12A / 32309 FlyBaseID:FBgn0030494 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_729143.2 Gene:l(3)mbn / 38701 FlyBaseID:FBgn0002440 Length:653 Species:Drosophila melanogaster


Alignment Length:71 Identity:17/71 - (23%)
Similarity:31/71 - (43%) Gaps:17/71 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 YEYRFELDD----GTARYERGYFVKINDVKTLMVVGYYAYRMTDGRYITVFYNADQFGYRQNQSI 106
            |::.|.:|:    ...|.|||           :::|.:.:...||.|....|..|:.|  :.:.|
  Fly    31 YKFGFTIDEQQHRAEKRDERG-----------IIMGEFGFITADGIYHVTVYATDEEG--KFRII 82

  Fly   107 TPQEYP 112
            :.:.||
  Fly    83 SMKSYP 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr12ANP_572896.1 Chitin_bind_4 46..100 CDD:278791 13/57 (23%)
l(3)mbnNP_729143.2 Chitin_bind_4 31..77 CDD:278791 13/56 (23%)
Chitin_bind_4 575..621 CDD:278791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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