DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpr12A and Cpr49Ab

DIOPT Version :9

Sequence 1:NP_572896.1 Gene:Cpr12A / 32309 FlyBaseID:FBgn0030494 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_610769.1 Gene:Cpr49Ab / 36345 FlyBaseID:FBgn0050042 Length:259 Species:Drosophila melanogaster


Alignment Length:114 Identity:30/114 - (26%)
Similarity:49/114 - (42%) Gaps:1/114 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SATLISAQQIKESAPSARLLDRFDNRYPDGSYEYRFELDDGTARYERGYFVKINDVKTLMVVGYY 79
            :|.|...:...|......::.:.|:...|| |.|.:|.::|....|.|...|:.:.:.|...|:|
  Fly   143 TANLPKGRGTGEGGNGWAIIRQEDDVEVDG-YHYLWETENGILGEESGRIEKLTEEEGLRSKGFY 206

  Fly    80 AYRMTDGRYITVFYNADQFGYRQNQSITPQEYPNLPRSIEVPMVSEASA 128
            .|...||....|.|.||..|:..:.:..|...|..|...::....||:|
  Fly   207 EYTGPDGILYRVDYVADDNGFVPSAAHLPTAPPPPPYVEKLLAFLEANA 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr12ANP_572896.1 Chitin_bind_4 46..100 CDD:278791 17/53 (32%)
Cpr49AbNP_610769.1 Chitin_bind_4 173..227 CDD:278791 17/53 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439108
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.