DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15754 and Lcp1

DIOPT Version :9

Sequence 1:NP_572894.1 Gene:CG15754 / 32307 FlyBaseID:FBgn0030492 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001260801.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster


Alignment Length:118 Identity:32/118 - (27%)
Similarity:51/118 - (43%) Gaps:24/118 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 PALPQPGGVLEELAGGQVDEELEDYNAWRDNFYELNEDGSYIFGYSIPHGIRRWEKGYYSEEQHG 222
            |.:|...|..|:: ...|..:.:|..|  |.|     |.|    ....:||.:...|    :.||
  Fly    18 PPVPHSLGRSEDV-HADVLSQSDDVRA--DGF-----DSS----LHTSNGIEQAASG----DAHG 66

  Fly   223 RVVEGF-YVQPRHDSQGLRYELRCYRADSEGYQPRPVEFLRTPPIVRRDAIPR 274
            .:...| ::.|    :|...|:: |.|:..||||... ::.|||.: .:||.|
  Fly    67 NIHGNFGWISP----EGEHVEVK-YVANENGYQPSGA-WIPTPPPI-PEAIAR 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15754NP_572894.1 None
Lcp1NP_001260801.1 Chitin_bind_4 46..93 CDD:278791 14/64 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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