DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Neto and Neto1

DIOPT Version :9

Sequence 1:NP_001285211.1 Gene:Neto / 32303 FlyBaseID:FBgn0265416 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_001100841.1 Gene:Neto1 / 307206 RGDID:1566269 Length:533 Species:Rattus norvegicus


Alignment Length:488 Identity:129/488 - (26%)
Similarity:205/488 - (42%) Gaps:103/488 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 SPEYPNLYPKNINCTRVITAPKGQIIRLDFRNSFNIEAKEGCKFDFLEIRDGQYGFSTLIGKFCG 218
            ||.||..||.:..|..:|.|...|.|.|.|...::||....||||.:|:|||.:|||.:||:|||
  Rat    55 SPNYPGKYPPDRECVYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCG 119

  Fly   219 TDFPPEITSKERYLWLHFHSDETIEYTGFSAVYEYLDRSRDAPSTDLN-------CTIDKGGFEG 276
            ...||.|.|..|:||:.|.:|..:|..||||.|.:   :.|....||.       |..:.||.||
  Rat   120 QQNPPVIKSSGRFLWIKFFADGELESMGFSARYNF---TPDPDFKDLGVLKPLPACEFEMGGPEG 181

  Fly   277 FINSTDVPAEIWEQVNRNKIALDCIWRIQVKENWKIFLKFLDFKLSKPNDCQTNFLDIFP-EQTV 340
            .:.|..:..|.....:.   |:||.|.|:.....||:|:|||:::...|:|:.||:.::. ..:|
  Rat   182 IVESIQILKEGKASASE---AVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSV 243

  Fly   341 MPLRVKNFCGSAGESITAESNILHLRFYADQTAINSTFGILFTAFRERGAACTEDEYDCEDATCI 405
            ..|:.| ||.:....:...:.:..:|.:||:.:.||.|.:|||:|:|  ..|..:.:.|....||
  Rat   244 EDLKAK-FCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQE--PPCEGNTFFCHSNMCI 305

  Fly   406 SKDLKCNNLDNCKFRWDEEGC---------------TSEAAGQSEHVVIIVIVFGLILGGMVITF 455
            :..|.||.|.||.:.|||..|               :....|.:..:|||:|:..:|:       
  Rat   306 NNTLVCNGLQNCVYPWDENHCKEKRKTSLLDQLTNTSGTVIGVTSCIVIILIIVSVIV------- 363

  Fly   456 IVNCIRKIIRDQKIIREHIRESKESKLDEMGRNSKGRSRENISRQKHSQTSLQILDDVSNRYYRE 520
                             .|::.::..:                 |:.|.....:..:|....:.|
  Rat   364 -----------------QIKQPRKKYV-----------------QRKSDFDQTVFQEVFEPPHYE 394

  Fly   521 AVPLSSQSSKADFK------EKEHSILRRHADMTQTSLCGVGEDDGESSSTTTATH------EMM 573
            ...|....:.|||.      |..|.:.|..:.......||......:.|.:..:|.      |:.
  Rat   395 LCTLRGTGATADFADVAEDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTRDASILAEIP 459

  Fly   574 TKAAMSAVP------------------SNACDM 588
            |:.....:|                  ::|||:
  Rat   460 TQPVKPLIPPVNRRNILVMKHNYSQDAADACDI 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetoNP_001285211.1 CUB 151..252 CDD:238001 45/97 (46%)
CUB <298..384 CDD:238001 27/86 (31%)
LDLa 392..426 CDD:238060 13/33 (39%)
Neto1NP_001100841.1 CUB 51..154 CDD:238001 46/98 (47%)
CUB <200..286 CDD:238001 27/86 (31%)
LDLa 291..326 CDD:412164 13/34 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I6911
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002629
OrthoInspector 1 1.000 - - otm46172
orthoMCL 1 0.900 - - OOG6_106092
Panther 1 1.100 - - O PTHR24251
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1989
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.910

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