DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Neto and neto1

DIOPT Version :9

Sequence 1:NP_001285211.1 Gene:Neto / 32303 FlyBaseID:FBgn0265416 Length:822 Species:Drosophila melanogaster
Sequence 2:XP_002940520.1 Gene:neto1 / 100492295 XenbaseID:XB-GENE-1013796 Length:529 Species:Xenopus tropicalis


Alignment Length:513 Identity:151/513 - (29%)
Similarity:231/513 - (45%) Gaps:81/513 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LTISRPPRAGRSERQAEEDQVD-RCRLFVEGDPTKNE----LYSPEYPNLYPKNINCTRVITAPK 175
            |.:|...:.|..::...|.|.. .|     |..||:.    ..||.|||.||.:..|..:|.|..
 Frog    17 LHVSWATKTGEDKQTTTEGQKPVEC-----GSWTKHSNGGTFTSPNYPNKYPPDRECIYIIEAAP 76

  Fly   176 GQIIRLDFRNSFNIEAKEGCKFDFLEIRDGQYGFSTLIGKFCGTDFPPEITSKERYLWLHFHSDE 240
            .|.|.|.|..:::||:...||||.:|:|||.:|||.:||::||...||.|.|..|:||:.|.:|.
 Frog    77 RQCIELHFDENYSIESSWECKFDHIEVRDGPFGFSPIIGRYCGQQSPPFIKSSGRFLWIKFFADG 141

  Fly   241 TIEYTGFSAVYEYLDRSRDAPSTDLN-------CTIDKGGFEGFINSTDVPAEIWEQVNRNKIAL 298
            .::..||||.|.:   :.|....||.       |..:.||.||.|.|..:..|.....|.   |:
 Frog   142 ELQSLGFSAQYNF---TPDPDFKDLGILKPLPVCEFEMGGPEGIIESMQIVKEGKASANE---AV 200

  Fly   299 DCIWRIQVKENWKIFLKFLDFKLSKPNDCQTNFLDIFP-EQTVMPLRVKNFCGSAGESITAESNI 362
            ||.|.|:.....||:|:|||:::...|:|:.||:.::. ..:|..||.| ||.:....:...:.:
 Frog   201 DCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLRAK-FCSTVANDVMLSTGL 264

  Fly   363 LHLRFYADQTAINSTFGILFTAFRERGAACTEDEYDCEDATCISKDLKCNNLDNCKFRWDEEGC- 426
            ..:|.:||:.:..|.|.:|||:|:|  ..|..:.:.|....||:..|.||.:.||.:.|||..| 
 Frog   265 GVIRMWADEGSRTSRFQMLFTSFQE--PPCEANSFFCHSNMCINNTLVCNGIQNCVYPWDENHCK 327

  Fly   427 --------------TSEAAGQSEHVVIIVIVFGLILGGMVITFIVNCIRKIIR-----DQKIIRE 472
                          :....|.|..:|||:|:..      ||..|....:|.::     ||.:.:|
 Frog   328 EKRKSNLLDQLTNTSGTVIGVSSCIVIILIIIS------VIVQIKQPRKKFVQRKTDFDQTVFQE 386

  Fly   473 HIRESKESKL----------------DEMGRNSK-GRSRENISRQKH--SQTSLQILDDVSNRYY 518
             :.|....:|                |:.....| .||........|  ||.| .|....||...
 Frog   387 -VFEPPHYELCTLRGTEPTADLADVADDFENYHKLRRSSSKCIHDHHCGSQIS-SIKGSRSNLSM 449

  Fly   519 REAVPLS-SQSSKADFKEKEHSILRRHA---DMTQTSLCGVGE-DDGESSSTTTATHE 571
            |:|..|| :||.......:.:.::.:|:   |...|  |.:.| :|..::|...:.||
 Frog   450 RDASLLSETQSQPVKPLNRRNILVMKHSYSQDAADT--CDIDEIEDVPTTSHRLSRHE 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NetoNP_001285211.1 CUB 151..252 CDD:238001 44/104 (42%)
CUB <298..384 CDD:238001 27/86 (31%)
LDLa 392..426 CDD:238060 12/33 (36%)
neto1XP_002940520.1 CUB 41..154 CDD:238001 49/117 (42%)
CUB <200..286 CDD:238001 27/86 (31%)
LDLa 291..326 CDD:381805 12/34 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 101 1.000 Domainoid score I6840
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002629
OrthoInspector 1 1.000 - - otm49255
Panther 1 1.100 - - O PTHR24251
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1989
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.010

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