DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and SET1

DIOPT Version :10

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_011987.1 Gene:SET1 / 856519 SGDID:S000001161 Length:1080 Species:Saccharomyces cerevisiae


Alignment Length:1083 Identity:225/1083 - (20%)
Similarity:363/1083 - (33%) Gaps:335/1083 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   600 PPLKDESDPKQTEVELPESKPAVNIP-KSERILSAEVETTSSPLVPPECCTLESVSGPVLLETSL 663
            |.:| .|||:.....:...|.|.:.. ::..||...:......|.||..|  |.|..|       
Yeast   200 PEIK-ASDPRNENGIMTSGKVATHRKCRNSLILLPRISYDRYSLGPPPSC--EIVVYP------- 254

  Fly   664 STEEKSNENVETTPLKTEAAKEDSPPAAPEEEASNSSEEPN-------FLLEDYESNQEQVAEDE 721
             .::.:..|::...:|....|...   ....||.|   :||       :|:: |.|:..::    
Yeast   255 -AQDSTTTNIQDISIKNYFKKYGE---ISHFEAFN---DPNSALPLHVYLIK-YASSDGKI---- 307

  Fly   722 MMKCNNQKGQKQTPLPEMKEPEKPVAETVSKKEKAMENPARSS---------PAIVDKKVRAGEM 777
                              .:..|.....|.|.|        ||         ..|::|......:
Yeast   308 ------------------NDAAKAAFSAVRKHE--------SSGCFIMGFKFEVILNKHSILNNI 346

  Fly   778 EKKVVKSTKGTVPEKKMDSKKSCAAVTPAKQKESGKSAKEAILKKETEKEKSSAKLDSSSPNTLD 842
            ..|.|:     :..||:.           |.:|:.|.|||    ||.|.||:.           :
Yeast   347 ISKFVE-----INVKKLQ-----------KLQENLKKAKE----KEAENEKAK-----------E 380

  Fly   843 KKGKD-TAQWSPQLQTLPKSSTKPPQESAPSVISKTTSNQPAPKEEQHAAKKGLSDNSPPSVLKA 906
            .:||| |....|::.||..||..  ::..|..:....:|:|.    .|.:|          :..|
Yeast   381 LQGKDITLPKEPKVDTLSHSSGS--EKRIPYDLLGVVNNRPV----LHVSK----------IFVA 429

  Fly   907 KEKAVSGFVECDAMFKAMDLANAQLRLDEKNKKKLKKVPTKVEAPPKVEPPTAVPVPGQKKSLSG 971
            |.:    |...|..:|......|:.                      ::.||.:.:         
Yeast   430 KHR----FCVEDFKYKLRGYRCAKF----------------------IDHPTGIYI--------- 459

  Fly   972 KTSLRRNTVYEDSPNLERNSSPSSDSAQANTSAGKLKPSKVK-KKINPRRSTICEAAKDLRSSSS 1035
                    ::.|..:.:..|:..|.:....:.:.:: |..:| ..|.||........|.  ||||
Yeast   460 --------IFNDIAHAQTCSNAESGNLTIMSRSRRI-PILIKFHLILPRFQNRTRFNKS--SSSS 513

  Fly  1036 SSTPTREVAASSPVSTSSDSSSKRNGSKRTTSDLDGGSKLDQRRYTI---CEDRQPETAIPVPLT 1097
            :||       :.|:...|........:|:...||:....:|.::..|   ..|.......|..|.
Yeast   514 NST-------NVPIKYESKEEFIEATAKQILKDLEKTLHVDIKKRLIGPTVFDALDHANFPELLA 571

  Fly  1098 KRRFSMHPK---ASANPLHDTLLQTAGKKRG----------RKEGKESLSRQNS--LDSSSSASQ 1147
            ||......|   .::....|.|.:....||.          .|..|.:|.|.||  ||.:|.   
Yeast   572 KRELKEKEKRQQIASKIAEDELKRKEEAKRDFDLFGLYGGYAKSNKRNLKRHNSLALDHTSL--- 633

  Fly  1148 GAPKKKALKSAEILSAALL--ETESSESTSSGSKMSRWDVQTSPELEAANPFGDIAKFIEDGVNL 1210
               |:|.|.:.....|.||  ||:|.|:|                     |..|      :|:. 
Yeast   634 ---KRKKLSNGIKPMAHLLNEETDSKETT---------------------PLND------EGIT- 667

  Fly  1211 LKRDKVDEDQRKEGQDEVKREADPEEDEFAQRVANMETPATTPTPS---------PTQSNPEDSA 1266
                :|.::..:|.::.....::.||:|...:....|:..|||...         |.|:...|..
Yeast   668 ----RVSKEHDEEDENMTSSSSEEEEEEAPDKKFKSESEPTTPESDHLHGIKPLVPDQNGSSDVL 728

  Fly  1267 STTTVLKELETGGGVRRSHRIKQ---KPQGPRASQGRGVASVALAPISMDEQLAELANIEAINEQ 1328
            ..:::.|...|        .|.:   .|:.......:.::|:.|.....||:  ::..::.:...
Yeast   729 DASSMYKPTAT--------EIPEPVYPPEEYDLKYSQTLSSMDLQNAIKDEE--DMLILKQLLST 783

  Fly  1329 FLRSEGLNTFQLLKENFYRCARQVSQENAEMQCDCFLTG---DEEAQGHLSCGAGCINRM---LM 1387
            :..:....|...|:...::..|:|.:|.........|.|   |.|.|...|..|....::   |.
Yeast   784 YTPTVTPETSAALEYKIWQSRRKVLEEEKASDWQIELNGTLFDSELQPGSSFKAEGFRKIADKLK 848

  Fly  1388 IECGP------------------------LC--------------------SNGARCTNKRFQQH 1408
            |...|                        ||                    |...|.:|:||||.
Yeast   849 INYLPHRRRVHQPLNTVNIHNERNEYTPELCQREESSNKEPSDSVPQEVSSSRDNRASNRRFQQD 913

  Fly  1409 QCWPCRVFRTEKKGCGITAELL-----------------------------IPPGEFIMEYVGEV 1444
                   ...:|...|..:|||                             |...|.|:|||||.
Yeast   914 -------IEAQKAAIGTESELLSLNQLNKRKKPVMFARSAIHNWGLYALDSIAAKEMIIEYVGER 971

  Fly  1445 IDSEEFERRQHLYSKDRNRHYYFMALRGEAVIDATSKGNISRYINHSCDPNAETQKWTVNGELRI 1509
            |.....|.|:..|.|:.....|...:....|||||.||.|:|:|||.||||...:...|.|..||
Yeast   972 IRQPVAEMREKRYLKNGIGSSYLFRVDENTVIDATKKGGIARFINHCCDPNCTAKIIKVGGRRRI 1036

  Fly  1510 GFFSVKPIQPGEEITFDYQYLRYGRDAQR--CYCEAANCRGWI 1550
            ..::::.|...||:|:||::.|...|.:|  |.|.|.||:|::
Yeast  1037 VIYALRDIAASEELTYDYKFEREKDDEERLPCLCGAPNCKGFL 1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 valS <709..832 CDD:237855 25/131 (19%)
AWS 1358..1410 CDD:197795 19/101 (19%)
SET_SETD2 1410..1551 CDD:380949 54/172 (31%)
WW 2014..2043 CDD:459800
SRI 2266..2355 CDD:462404
SET1NP_011987.1 AF-4 <11..>136 CDD:461550
RRM_scSet1p_like 246..360 CDD:409743 27/176 (15%)
SET_assoc 422..486 CDD:432058 13/116 (11%)
N-SET 763..932 CDD:463344 32/177 (18%)
SET_SET1 926..1076 CDD:380998 50/149 (34%)
Blue background indicates that the domain is not in the aligned region.

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