DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and BYE1

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_012921.3 Gene:BYE1 / 853865 SGDID:S000001488 Length:594 Species:Saccharomyces cerevisiae


Alignment Length:648 Identity:118/648 - (18%)
Similarity:226/648 - (34%) Gaps:180/648 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 TNSTSTTTSN-----MSSDSGELPGFPIQKPKSKLRVSLKRLKLGGRLESSDSGNSPSSSSPEVE 286
            |:|.|....|     :..:..|.|    :|.::|.:|           :|:...|..|.||.|  
Yeast     5 TSSRSNKGQNKYIEYLLQEETEAP----KKKRTKKKV-----------DSAIEKNKKSDSSQE-- 52

  Fly   287 PPALQDENA-MDERPKQEQNLSRMVDAEENSDSDSQIIFIEIETESPKGEEEQEEGRPV------ 344
             |....||. .||..:.::...|.:....|.:.|:        .|...|:..|.:|...      
Yeast    53 -PRKDTENVRTDEVDEADEGYVRCLCGANNENYDA--------AEYSHGDMVQCDGCDTWQHIKC 108

  Fly   345 EVEPQDLID-------------------IDMELAKQEPTPDPEEDLDEIMVEVLSGPPSLWSADD 390
            ..:.:|.||                   ..:|.:|:....:.|:..|::...|          :|
Yeast   109 MTDGKDTIDGLMSEDSKYYCELCDPSLYAHLETSKEAEVSEDEDYHDDVYKPV----------ND 163

  Fly   391 EAEEEEDATVQRATPPGKEPAADSCSSAPRRSRRSAPLSGSSRQGKTLEETFAEIAAESSKQILE 455
            ..:.:.|..:...:|..::.:.||......:|::....:||.::.|:::..    .:::::..:.
Yeast   164 HDDNDADVFLDEESPRKRKRSPDSAKGIHIKSKQVKKSNGSKKRNKSIDAA----KSDTAENEMP 224

  Fly   456 AEESQDQEEQHILIDLIEDTLSESEVTSSVSPTIEHMVVEEVVVEENQLVDEADEILDSKQEF-- 518
            ..:..:.|::|.|....|...|.......|..|||..:.|         :.:..:::...|||  
Yeast   225 TRKDFESEKEHKLRYNAEKMFSTLFSKFIVPETIEAKLYE---------LPDGKDVISISQEFAH 280

  Fly   519 ----------------VIKKVFSESDNIAASLNKDIFEPKVETKATCGEVVPRPEMVTEDVYITE 567
                            .:.|:::|......|..||  :..:|.||                ::.|
Yeast   281 NLEEELYKACLNVEFGTLDKIYTEKVRSLYSNLKD--KKNLELKA----------------HVVE 327

  Fly   568 GIAATLEK-----SAVVTKPTTEMIAETKLSDEVVIEPPLKDESDPKQTEVELPESKPAVNIPKS 627
            | ...|.|     ::.:..|..:...|.:  |::::|..:          ||:|:....|...|.
Yeast   328 G-KLPLNKLVNMNASELANPDLQEFKEKR--DKIILENFI----------VEVPDKPMYVKTHKG 379

  Fly   628 ERILSAEVETTSSPLVPPECCTLESVSGPVLLETSLSTEEKSNENVETTPLKTEA-AKEDSPPAA 691
            :.::....|.....|...:...|.::.       |:.:::...|       :|.| :||.||...
Yeast   380 DELIEDIAEPQEDILYSKDSIRLHNID-------SIDSDKSKIE-------QTHAISKEPSPSTI 430

  Fly   692 PEEEASNSS-EEPNFLLE-----DYESNQEQVAEDEMMKCNNQ-----KGQ--KQTPLPEMKEPE 743
            ..||:.|.: ..|...||     :|....:::..|...:....     :|:  ..|..|.:||..
Yeast   431 INEESLNCAFLYPGLGLEFTGYLNYIGASQKLRRDIFKEAIGDGKLYVEGRLPTTTAAPYLKEIS 495

  Fly   744 ----------KPVAETVSKKEKA-----MENPARSSPAIVDKKVRAGEMEKKVVKSTKGTVPE 791
                      .|..::.||...|     :||..|.  |.:..|.|. |.:..:|.|..|.:||
Yeast   496 CSRAILVYQLFPSNDSESKTTFADVVDSLENKGRI--AGIKPKTRY-EKDFYIVPSKGGEIPE 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795
SET 1414..1533 CDD:214614
PostSET 1535..1551 CDD:214703
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
BYE1NP_012921.3 PHD_Bye1p_SIZ1_like 74..131 CDD:277045 10/64 (16%)
TFS2M 235..354 CDD:128786 25/146 (17%)
SPOC 434..589 CDD:400205 28/125 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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