DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and SET4

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_012430.1 Gene:SET4 / 853339 SGDID:S000003641 Length:560 Species:Saccharomyces cerevisiae


Alignment Length:628 Identity:117/628 - (18%)
Similarity:211/628 - (33%) Gaps:230/628 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1026 AAKDLRSSSSSSTPTREVAASSPVSTSSDSSSKRNGSKRTTSDLDGGSKLDQRRYTICEDRQPET 1090
            :::.:|...:.:|..:.::.||..|::| |.||..|.....|.....|:                
Yeast     8 SSRHIRQGRTYTTTDKVISRSSSYSSNS-SMSKDYGDHTPLSVSSAASE---------------- 55

  Fly  1091 AIPVP--LTKRRFSMHPKASANPLHDTLLQ----------------TAG-KKRG----------- 1125
            .:|.|  :..|.|:..|.|...|||  |.|                ||. .|||           
Yeast    56 TLPSPQYMPIRTFNTMPTAGPTPLH--LFQNDRGIFNHHSSSGSSKTASTNKRGIAAAVALATAA 118

  Fly  1126 ------RKEGKE----------SLSRQNSLDSSSSASQGAPKKKALKSAEILSAALLETESSEST 1174
                  :|:.::          ..|::|.:..|..|....||...:            ..||:|.
Yeast   119 TIPFPLKKQNQDDNSKVSVTHNESSKENKITPSMRAEDNKPKNGCI------------CGSSDSK 171

  Fly  1175 S----SGSKMSRWDVQTSPELEAANPFGDIAKFIEDGVNLLKRD----KVDEDQRKEGQDEVKRE 1231
            .    ..:|...|..:.....:.::|              :|||    :.|.|.:.: .::||..
Yeast   172 DELFIQCNKCKTWQHKLCYAFKKSDP--------------IKRDFVCKRCDSDTKVQ-VNQVKPM 221

  Fly  1232 ADPEE--DEFAQRVANMETPATTPTPSPTQS--NPED---------SASTTTVLKELETGGGVRR 1283
            ..|.:  ||...:.:::.|.:.:.|....||  |.|:         :|.||      |....:|:
Yeast   222 IFPRKMGDERLFQFSSIVTTSASNTNQHQQSVNNIEEQPKKRQLHYTAPTT------ENSNSIRK 280

  Fly  1284 SHRIKQKPQGPRASQGRGVASVALAPISMDEQLAELANIEAINEQFLRSEGLNTF-----QLLKE 1343
            ..|          .:...|:|..|.|:        |..:.:.|:...::..::.:     ::..:
Yeast   281 KLR----------QEKLVVSSHFLKPL--------LNEVSSSNDTEFKAITISEYKDKYVKMFID 327

  Fly  1344 NFYR-----CARQVSQENAEMQCDCFLTGDEEAQGHLSCGAGCINRMLMIECGPLCSNGARCTNK 1403
            |.|.     |:...|..:|:::.                                    .:.:|:
Yeast   328 NHYDDDWVVCSNWESSRSADIEV------------------------------------RKSSNE 356

  Fly  1404 RFQQHQCWPCRVFRTEKKGCGITAELLIPPGEFIMEYVGEVIDSEEFERRQHLYSKDRNRHYYFM 1468
            |                 ..|:.|......||.|.||:|::    :|::.   |..|.|..|..|
Yeast   357 R-----------------DFGVFAADSCVKGELIQEYLGKI----DFQKN---YQTDPNNDYRLM 397

  Fly  1469 ALRGEAV---------IDATSKGNISRYINHSCDPNAE-------TQKWTVNGELRIGFF--SVK 1515
            ......|         ||:...|.::|||..||:||.|       .:|...:.:.|:.|.  :::
Yeast   398 GTTKPKVLFHPHWPLYIDSRETGGLTRYIRRSCEPNVELVTVRPLDEKPRGDNDCRVKFVLRAIR 462

  Fly  1516 PIQPGEEITFDYQYLRYGRDAQRCYCEAANCRGWIGGEPDSDE 1558
            .|:.||||:.::|:     |.:....|..|....:...||.|:
Yeast   463 DIRKGEEISVEWQW-----DLRNPIWEIINASKDLDSLPDPDK 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795 2/51 (4%)
SET 1414..1533 CDD:214614 35/136 (26%)
PostSET 1535..1551 CDD:214703 3/15 (20%)
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
SET4NP_012430.1 SET 16..526 CDD:225491 116/620 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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