DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and SUVH3

DIOPT Version :10

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_565056.1 Gene:SUVH3 / 843641 AraportID:AT1G73100 Length:669 Species:Arabidopsis thaliana


Alignment Length:629 Identity:137/629 - (21%)
Similarity:226/629 - (35%) Gaps:182/629 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1095 PLTKRRFSMHPKASANPLHDT--LLQT---------------------------AGKKRG----- 1125
            |.:....|..|..:..|.|||  |.||                           :|.|||     
plant    51 PSSSEYSSFFPFGAQQPTHDTPDLNQTQNTPIPSFVPPLRSYRTPTKTNGPSSSSGTKRGVGRPK 115

  Fly  1126 -----RKEGKESLSRQNSLD-------SSSSASQGAPKKKALKSAEILSAALLE----------- 1167
                 :|:.|::::.:.:||       ||...|..:..::...:|.::|:.|:.           
plant   116 GTTSVKKKEKKTVANEPNLDVQVVKKFSSDFDSGISAAEREDGNAYLVSSVLMRFDAVRRRLSQV 180

  Fly  1168 --TESSESTSSGSKMS-------RWDVQTSPELEAANPFGDIAKFIEDGVNLLKRDKVDEDQRKE 1223
              |:|:.|.::|:.||       :..|.|.|.:|..:.|....:....|:::.....:|....|.
plant   181 EFTKSATSKAAGTLMSNGVRTNMKKRVGTVPGIEVGDIFFSRIEMCLVGLHMQTMAGIDYIISKA 245

  Fly  1224 GQDE------------VKREA-DPEEDEFAQRVANMETPATTPTPSPTQSN-------------- 1261
            |.||            .:.|| |||...::.:..|.:...........:.|              
plant   246 GSDEESLATSIVSSGRYEGEAQDPESLIYSGQGGNADKNRQASDQKLERGNLALENSLRKGNGVR 310

  Fly  1262 ----PEDSASTT--------------TVLKELETGGGVRRSHRIKQKPQGPRASQGRGV------ 1302
                .||:||.|              :.:::.::|....:...::|..|.|.....:.|      
plant   311 VVRGEEDAASKTGKIYIYDGLYSISESWVEKGKSGCNTFKYKLVRQPGQPPAFGFWKSVQKWKEG 375

  Fly  1303 ----ASVALAPISMDEQLAELANIEAINEQ-----FLRSEGL---NTFQLLKENFYRCARQVSQE 1355
                ..:.|..::...:...::.:..::|.     |..:..|   .||: |.:....|:...|..
plant   376 LTTRPGLILPDLTSGAESKPVSLVNDVDEDKGPAYFTYTSSLKYSETFK-LTQPVIGCSCSGSCS 439

  Fly  1356 NAEMQCDCFLTGDEEAQGHLSCGAGCI---NRMLMIECGPLCSNGARCTNKRFQQHQCWPCRVFR 1417
            .....|.|....|    |.|....|.|   .|.::.||||.|...|.|.|:..|........||:
plant   440 PGNHNCSCIRKND----GDLPYLNGVILVSRRPVIYECGPTCPCHASCKNRVIQTGLKSRLEVFK 500

  Fly  1418 TEKKGCGITAELLIPPGEFIMEYVGEVIDSEEFERRQH--LYSKDRNRHY------YFMALRGE- 1473
            |..:|.|:.:...:..|.||.||.|||.|:......|.  .|..|.:|.:      |...|..| 
plant   501 TRNRGWGLRSWDSLRAGSFICEYAGEVKDNGNLRGNQEEDAYVFDTSRVFNSFKWNYEPELVDED 565

  Fly  1474 --------------AVIDATSKGNISRYINHSCDPNAETQKWTV-----NGE--LRIGFFSVKPI 1517
                          .:|.|...||::|::||||.||.   .|..     |||  :.|.||:::.|
plant   566 PSTEVPEEFNLPSPLLISAKKFGNVARFMNHSCSPNV---FWQPVIREGNGESVIHIAFFAMRHI 627

  Fly  1518 QPGEEITFDY----------QYLRYGRDAQRCYCEAANCRGWIG 1551
            .|..|:|:||          :.|.:|:  :.|.|.:..|||..|
plant   628 PPMAELTYDYGISPTSEARDESLLHGQ--RTCLCGSEQCRGSFG 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 valS <709..832 CDD:237855
AWS 1358..1410 CDD:197795 17/54 (31%)
SET_SETD2 1410..1551 CDD:380949 52/180 (29%)
WW 2014..2043 CDD:459800
SRI 2266..2355 CDD:462404
SUVH3NP_565056.1 SRA 203..359 CDD:197742 25/155 (16%)
SET 410..638 CDD:394802 68/235 (29%)
Blue background indicates that the domain is not in the aligned region.

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