DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and ATX1

DIOPT Version :10

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_850170.1 Gene:ATX1 / 817721 AraportID:AT2G31650 Length:1062 Species:Arabidopsis thaliana


Alignment Length:950 Identity:168/950 - (17%)
Similarity:289/950 - (30%) Gaps:350/950 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   742 PEKPVAETVSKKEKAMENPARSSPAIVDK--------KVRAGEMEKKVVKSTKGTVPEKKMDSKK 798
            |...|.|::..:.|.:.|......:::.:        :::.    |:.:...||.:....:..|:
plant   316 PAVIVDESIIGERKGLNNKVSGGGSLLVQFFGTHDFARIKV----KQAISFIKGLLSPSHLKCKQ 376

  Fly   799 SCAAVTPAKQKESGKSAKEAILK------KETEKEKSSAKLDSSSPNTLDKKG------KDTAQW 851
                    .:.|.|....:..||      :.::.:|.:..:||...|:.::..      .|...|
plant   377 --------PRFEEGMQEAKMYLKAHRLPERMSQLQKGADSVDSDMANSTEEGNSGGDLLNDGEVW 433

  Fly   852 SPQLQTLPKSSTKPPQ---------ESAPSVISKTTSNQPAPKEEQHAAKKGLSDNSPPSVLKAK 907
                       .:|.:         :.....:.|..::....|:|.|...:|.:         |.
plant   434 -----------LRPTEHVDFRHIIGDLLIINLGKVVTDSQFFKDENHIWPEGYT---------AM 478

  Fly   908 EKAVSGFVECDAMFKAMDLANAQLRLDEKNKKKLKKVPTKVEAPPKVEPPTAVPVPGQKKSLSGK 972
            .|..|                    |.:.:...|.|:....:|..|..|...|.....::.....
plant   479 RKFTS--------------------LTDHSASALYKMEVLRDAETKTHPLFIVTADSGEQFKGPT 523

  Fly   973 TSLRRNTVYEDSPNLERNSSPSSDSAQANTSA----GKLKPSKVKKKINPRRSTICEAAKDLRSS 1033
            .|...|.:|.....::.:.||:....:.|.|.    |...|..:|            ..:||   
plant   524 PSACWNKIYNRIKKVQNSDSPNILGEELNGSGTDMFGLSNPEVIK------------LVQDL--- 573

  Fly  1034 SSSSTPTREVAASSPVSTSSDSSSKRNGS-------KRTTSDLDGGSKLDQRRYTICE-DRQPET 1090
             |.|.|      ||.||...:|..:....       :....|||        :..:|. |.:.|.
plant   574 -SKSRP------SSHVSMCKNSLGRHQNQPTGYRPVRVDWKDLD--------KCNVCHMDEEYEN 623

  Fly  1091 AIPVPLTKRRFSMHPK--ASANPLHDTLLQTAGKKRGRKEGKESLSRQNSLDSSSSASQGAPKKK 1153
            .:.:...|.|..:|.|  ....|....|...            :|.|..:.|        .|.:.
plant   624 NLFLQCDKCRMMVHAKCYGELEPCDGALWLC------------NLCRPGAPD--------MPPRC 668

  Fly  1154 ALKSAEILSAALLETESSESTSSGSKMSRWDVQTSPELEAA-----NPFGDIAKFIE-DGVNLLK 1212
            .|  ..::..|:      :.|:.|    ||     ..|..|     ....|:.|... ||||.:.
plant   669 CL--CPVVGGAM------KPTTDG----RW-----AHLACAIWIPETCLSDVKKMEPIDGVNKVS 716

  Fly  1213 RDK----------------------------------------VDEDQRKEGQDEVKREADP--- 1234
            :|:                                        ::.|...||:     |||.   
plant   717 KDRWKLMCTICGVSYGACIQCSNNSCRVAYHPLCARAAGLCVELENDMSVEGE-----EADQCIR 776

  Fly  1235 -----------------EEDEFAQRVANMETPATTPTPSPT---------------QSNPEDSAS 1267
                             .||..  :.|..:|....|.|:|:               :..||..|:
plant   777 MLSFCKRHRQTSTACLGSEDRI--KSATHKTSEYLPPPNPSGCARTEPYNCFGRRGRKEPEALAA 839

  Fly  1268 TTTVLKELET-----GGGVRRSHRIKQKPQGPRASQGRGVASVALAPISMDEQLAELANIEAINE 1327
            .::....:|.     ||..|......:...|.:.||....:::    :||.|:            
plant   840 ASSKRLFVENQPYVIGGYSRLEFSTYKSIHGSKVSQMNTPSNI----LSMAEK------------ 888

  Fly  1328 QFLRSEGLNTFQLLKENFYRCARQVSQENAEMQCDCFLTGDEEAQGHLSCGAGCINRMLMIECGP 1392
                              ||..|:..::                  .|:.|...|:         
plant   889 ------------------YRYMRETYRK------------------RLAFGKSGIH--------- 908

  Fly  1393 LCSNGARCTNKRFQQHQCWPCRVFRTEKKGCGITAELLIPPGEFIMEYVGEVIDSEEFERRQHL- 1456
                                         |.||.|:|....|:.::||.||::.....::|:.| 
plant   909 -----------------------------GFGIFAKLPHRAGDMMIEYTGELVRPSIADKREQLI 944

  Fly  1457 YSKDRNRHYYFMALRGEAVIDATSKGNISRYINHSCDPNAETQKWTVNGELRIGFFSVKPIQPGE 1521
            |:.......|...:..|.|||||..|:|:..|||||.||..::..||||:..|..|:.:.|...|
plant   945 YNSMVGAGTYMFRIDDERVIDATRTGSIAHLINHSCVPNCYSRVITVNGDEHIIIFAKRHIPKWE 1009

  Fly  1522 EITFDYQYLRYGRDAQRCYCEAANCRGWIGGEPDSDEGEQ 1561
            |:|:||::...| :...|.|....|||.:.   |::..||
plant  1010 ELTYDYRFFSIG-ERLSCSCGFPGCRGVVN---DTEAEEQ 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 valS <709..832 CDD:237855 14/103 (14%)
AWS 1358..1410 CDD:197795 3/51 (6%)
SET_SETD2 1410..1551 CDD:380949 47/141 (33%)
WW 2014..2043 CDD:459800
SRI 2266..2355 CDD:462404
ATX1NP_850170.1 Tudor_Agenet_AtEML-like 207..257 CDD:410475
PWWP_AtATX1-like 300..396 CDD:438970 13/91 (14%)
FYRN 447..497 CDD:461787 11/78 (14%)
FYRC 508..597 CDD:470645 21/110 (19%)
PHD_ATX1_2_like 611..657 CDD:276969 9/57 (16%)
ePHD_ATX1_2_like 668..784 CDD:277132 21/137 (15%)
SET_SETD1-like 885..1034 CDD:380916 52/235 (22%)
Blue background indicates that the domain is not in the aligned region.

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