DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Set2 and setd2

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:XP_009290459.1 Gene:setd2 / 794199 ZFINID:ZDB-GENE-030131-2140 Length:2737 Species:Danio rerio


Alignment Length:3118 Identity:626/3118 - (20%)
Similarity:1025/3118 - (32%) Gaps:1196/3118 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NPSPVASRGRGRGRPPKVALSALGNTPPHIN-----PSLKHADAEASPTA-----PEDQDSGQSE 63
            |.:.|....:||   .||:.|......|..|     ||.:.:.:|.|.|:     |....:||: 
Zfish    47 NKTKVNLEEQGR---QKVSFSLTQTKKPRQNVFLPPPSPEKSASEHSSTSQAGPVPVSVQAGQT- 107

  Fly    64 CRRSSRKKIIKFDVRDLLNKNRKAHKIQIEARIDSN-PSTGHSQSGTTAASTSM----------- 116
                       ::.::                :|:| |:.|.:|:..| .|.|:           
Zfish   108 -----------YETKN----------------VDTNTPAVGETQTAPT-VSFSLRSRHVLGKMHF 144

  Fly   117 ------STATASAASASSAATVSRLFSMFEMSHQSLPPPPPPPTALEIFAKPRPTQSLIVAQVTS 175
                  ||.....::.|:|:.        |:|.     |..|...:...||.....||   |.:.
Zfish   145 KKQILSSTVVGDKSTVSTASA--------EISE-----PVVPSDKITSSAKVETENSL---QQSH 193

  Fly   176 EPSAVGGA--------HPVQTMAGLPPVTPRKRGRPRKSQL----ADAAII----PTVIVPSCSD 224
            :.|.|.|:        :|.:.:|..      .:| |..|.:    .|::||    .:.....|||
Zfish   194 KNSVVDGSSEKVSKEENPQEKIASC------LKG-PDSSHIGKEDTDSSIISEHEESRKSKQCSD 251

  Fly   225 S-------DTNSTSTTTSNMSSD----------SGELPGFPIQKPK-SKLRVSLKRLKLGGRLES 271
            |       |..||.|::|..|:|          |.|:......|.: .|.|...|..:.|.|...
Zfish   252 SKLAGLETDGQSTRTSSSQKSNDRRNKTKSESHSNEVKRSSNSKTELDKSRTDRKDEEKGIRHSK 316

  Fly   272 SDSGNSPSSSSPEVEPPALQDENAMDERPKQEQNLSRMVDAEENSDSDSQIIFIEIETESPKGEE 336
            ||..:...||.        ...:..|.|..:.::.||...:..:|.|.|:....|.::.:.:...
Zfish   317 SDRDSRHMSSR--------SSRSDRDRRRTKSRSRSRSRGSRTSSYSRSERSRSERQSRTDRSHY 373

  Fly   337 EQEEGRPVEVEPQDLIDIDMELAKQEPTPDPEEDLDEIMVEVLSGPPSLWSADDEAEEEEDATVQ 401
            .:.|.|.....|.      .|........|..                   :.|.::.|:|.  :
Zfish   374 HESERRFHRSSPH------RERRSSRSRTDGR-------------------SRDSSDSEDDH--R 411

  Fly   402 RATPPGKEPAADSCSSAPRRSRRSAPLSGSSRQGKTLEETFAEIAAESSKQILEAEESQDQEEQH 466
            |....|.:.:..|..|:.::..:|:..|.|.|..|   .|....::||.|:   |:.|:.:..:.
Zfish   412 RTRTRGSDSSRSSTYSSSQKDSKSSTHSRSHRDSK---PTDCSRSSESDKR---AQHSKSESNRR 470

  Fly   467 ILIDL--------------IEDTLSESEVTSSVSPTIEHMVVEEVVVEENQLVDEADEILDSKQE 517
            ...::              :.|.:|.|.:|:| |.|.|..:.:              ...||.:|
Zfish   471 SSSEIDAVHKKSSARTKLEVNDKISNSNLTTS-SRTSEKKIHK--------------TSSDSDEE 520

  Fly   518 FVIKKVFSESD-----NIAASLNKDIFEPKVETKATCGEVVPRPEMVTEDVYITEGIAATLEKSA 577
            ...|:....||     ..::|...|:.:   ......|....|..        |:.:....:.|.
Zfish   521 HRRKRQSQGSDRSPRSGTSSSRKNDLVD---HNSFNIGTGTERQS--------TDRLNTNAKDSQ 574

  Fly   578 VVTKPTTEMIAETKLSDEVVIEPPLKDESDPKQTE----VELPE-SKPAVNIPKSERILSAEVET 637
            :|....|.....:.:.|:..  ||....|..:..|    |.|.| :|.|.:.|.::.:.|.|..|
Zfish   575 LVFVTVTSQKESSNIDDQCT--PPKSKNSSQQMHEATHKVNLCETNKKAEHQPSNQDLSSLEKCT 637

  Fly   638 TSSPLVPPECCTLESVSGPVLLETSLSTEEKSNENVE------TTPLKTEAAKEDSPPA-----A 691
            .    ||....|.|.::..:.: ||...|.:|...|:      |.|:::|........:     |
Zfish   638 N----VPESKKTTERLTESISI-TSGKLEVRSPTEVDEPGMKVTVPIQSEVLTVGQTESICVGPA 697

  Fly   692 PEEEASNSSEEPNFLLEDYESNQEQVAEDEMMKCNNQKGQKQTPLPEMKEPEKPVAETVSKKEKA 756
            |.|....|       |.|..|.:|...|..::.  |.|..:.:.:  :.:...||..||...||.
Zfish   698 PSEHTMGS-------LTDSLSVKELPPEGSLIL--NTKSDESSLI--ISQISTPVTLTVQPCEKD 751

  Fly   757 ME----NPARSSPAIVDKKVRAGEMEKKVVKSTKGTVPEKKMDSKKSCAAVTPAKQKESGKSAKE 817
            .|    :|.:.:..|..|...|.:....:|    |.|..:.....|   .|.|        ..|:
Zfish   752 SEQNIGSPEQPNTGISKKDASAKKSRWDIV----GQVTSEYQSPAK---LVNP--------DVKK 801

  Fly   818 AILKK-----ETEKEKSSAKLDSSSPN--TLDKKGKDTAQWSPQLQTLPKSSTKPPQESAPSVIS 875
            .:|.:     :|..:..|.|||...|:  :::...:||            ::.:..||     ||
Zfish   802 VMLAQKIEFSDTTPDNCSQKLDPEVPSEKSVEVHARDT------------TAAESHQE-----IS 849

  Fly   876 KTTSNQPAPKEEQHAAKKGLSDNSPPSVLKAKEKAVSGFVECDAMFKAMDLANAQLRLDEKNKKK 940
            ..|||         ...||..|.            :...||......|:.:::.|...::.|..|
Zfish   850 SFTSN---------FGTKGTHDE------------LQKTVEIPQSTSALVVSDFQPSKEKVNVDK 893

  Fly   941 LKKVPTKVEAPPKVEPPTAVPVPGQ------------KKSLSGKTSLRR---------NTVYEDS 984
            .|         |:::.|.::...|:            ..|..|:.||:|         |:.....
Zfish   894 TK---------PEIQDPDSLNHDGKCHSDDSESEESDSDSDDGRVSLKRLHSVVVVPKNSTIALE 949

  Fly   985 PNLERNSSPSSDSAQANTSAGKLKPSKVKKKINP-------RRSTICEAAKDLRSSSSSSTPTRE 1042
            .|.:...:|:|.....|      :.:...:.||.       .:||:.|::..|...|:      :
Zfish   950 TNDKAEPAPASSLFSGN------QQTDTHESINKEFPYGFNNQSTLKESSAALYKGSA------Q 1002

  Fly  1043 VAASSP----VSTSS-----DSSS---------KRNGSKRTTSDLDG--GSKLDQRRYTICEDRQ 1087
            .|..||    ||..|     ||:|         .:|.|.:...::.|  ..:..|.....||  :
Zfish  1003 AACQSPNVKGVSYQSQSNMVDSTSHLEVMSAHVDKNWSAQERPNISGQINQEYVQNFEKTCE--K 1065

  Fly  1088 PETAIPVPLTKRRFSMHPKASANPLHDTLLQTAGKKRGRKEGKESLSRQNSL--DSSSSASQGAP 1150
            |||.            |.:....|         ....||| |..|:.|.:||  |.:.|      
Zfish  1066 PETD------------HHQYHGRP---------DSWNGRK-GDFSVGRGDSLVWDFNQS------ 1102

  Fly  1151 KKKALKSAEILSAALLETESSESTSSG--SKMSRWDVQTSPELEAAN-------PFGDIAKFIED 1206
                    |..|:...:.:||.||...  ..:.|.|....|.:...:       ||.     ..|
Zfish  1103 --------EQPSSTFQQPDSSYSTPQPLFDSVHREDPWAQPAISKTSRTVNTHVPFQ-----YHD 1154

  Fly  1207 GVNLLKRDKV--DEDQRKEGQDEVKREADPEEDEFAQRVANME----TPATTPTPSPTQSNPEDS 1265
            .|:.:..|.:  |.|..:||                 |:..::    ..|..|.|||....||.|
Zfish  1155 LVHQIHPDSLTNDHDDDREG-----------------RILGIKQASLLSAGLPGPSPFVQAPEIS 1202

  Fly  1266 ASTTTVLKELETGGGVR----RSHRIKQKPQGPR---ASQGRGVASVALA----------PI--- 1310
            ::.:...:........|    :.||.:..|:..|   .|:....|...|:          |:   
Zfish  1203 SNCSFTTESQNISEAPRDDNQKPHRGRGPPKKRRQEFESESDNEAEAGLSKRECFDESSRPLKDA 1267

  Fly  1311 -----SMDEQLAELANIEAINEQFLRSEGLNT------FQLLKENFYRCARQVSQENAE---MQC 1361
                 .:.|....|.:::..::.|:..:....      |.|::||.|...|:.::.:.:   |||
Zfish  1268 KESFHQIQEVQRPLLSLKEFSDPFVWRDKAKQKKMPPYFDLIEENLYLTERKKNKSHRDIKRMQC 1332

  Fly  1362 DC-FLTGDEEAQGHLSCGAGCINRMLMIECGPLCSNGARCTNKRFQQHQCWPCRVFRTEKKGCGI 1425
            :| .|:.:|.|:|.|:||..|:||:|||||...|.|||.|:|:|||..|.....|..||.||.|:
Zfish  1333 ECAILSKEERARGILACGEDCLNRLLMIECSSRCLNGAYCSNRRFQMKQHADYEVILTESKGWGL 1397

  Fly  1426 TAELLIPPGEFIMEYVGEVIDSEEFERRQHLYSKDRNRHYYFMALRGEAVIDATSKGNISRYINH 1490
            .|...:.|..|::||.|||:|..||:.|...|::::|.|||||||:...:||||.|||.||::||
Zfish  1398 RAAKDLQPNTFVLEYCGEVLDHREFKARVKEYARNKNIHYYFMALKNNEIIDATLKGNCSRFMNH 1462

  Fly  1491 SCDPNAETQKWTVNGELRIGFFSVKPIQPGEEITFDYQYLRYGRDAQRCYCEAANCRGWIGGEPD 1555
            ||:||.|||||||||:||||||:.|.:..|.|:|||||:.|||::||:|:|.|.:|||.||||  
Zfish  1463 SCEPNCETQKWTVNGQLRIGFFTTKAVTAGTELTFDYQFQRYGKEAQKCFCGAPSCRGLIGGE-- 1525

  Fly  1556 SDEGEQLDEESDSDAEMDEEELEAEPEEGQPRKSAKAKAKSKLKAKLPLATGRKRKEQTKPKDRE 1620
                                          .|.|.:|            |.|:|::|:::.||  
Zfish  1526 ------------------------------TRVSVRA------------AGGKKQRERSRKKD-- 1546

  Fly  1621 YKAGRWLKPSATGSSSSAEKPPKKPKVNKFQAMLEDPDVVEELSLLRRG--GLKNQQDTLRFSRC 1683
                       |.|:.:.                    :.|||..|:..  ||..:::.:...|.
Zfish  1547 -----------TDSALTT--------------------LDEELEALQENGEGLCGEKEVISLCRL 1580

  Fly  1684 LVRAKLLKTRLALLRVLTHGELP-CRRLFLDYHGLRLLHAWI---------SENGNDDQLREALL 1738
            :||.:.::.||..|:::.:.:.| |.:.|||:|||.||  ||         :.:.|:.:|:..::
Zfish  1581 MVRVETMEQRLTCLKLIQNTQNPLCLKQFLDHHGLSLL--WIFMVELSEAKTNSVNNIKLQLEIM 1643

  Fly  1739 DTLESLPIPNRTMLSDSRVYQSVQLWS-------------------------------------- 1765
            ..|..|||..:.||.:|||.|.:|.|:                                      
Zfish  1644 KALSVLPISTKNMLEESRVLQFIQRWAQSRSLSQPAEQDGYSSESTSRAQTPLNTPDGPPAKLAT 1708

  Fly  1766 --------------------NSLEQQL-------------------------------------- 1772
                                |||:..|                                      
Zfish  1709 ELDGDTPKRAVYRRLKIISENSLDSALSDASKASDGKEEEDEEEEEMEDEPSKLESTTERKIKVE 1773

  Fly  1773 ----------------------------------------------------------------- 1772
                                                                             
Zfish  1774 STEAPPVSQAELEVELKQEAPETVEIPRLMPEAVGSEGETLETQEPEEKLLCTPEGQLKDEKTVE 1838

  Fly  1773 ----------------------------------------------------------------- 1772
                                                                             
Zfish  1839 ETKSDEPSENQTESAAVKEDPLVTDTTSAADISNDVVADAETPVTETQVENASSEQSTSEEDASC 1903

  Fly  1773 ----------------------------------------------------------------- 1772
                                                                             
Zfish  1904 STAEITSAQPAEVIIEGISSDSAAIVIKSTPKESPSVSVKTPPTGSDVVSNGNAPSEAVFAPSEA 1968

  Fly  1773 -------AVVPQEKQAALHKRMVA----------------------------------------- 1789
                   ||.|.|..|:..:.:.:                                         
Zfish  1969 VAAPLEAAVAPSEAVASFPEAVASLPETVAAPAEAVDEPAEAVADPAEAVADPAEAVADPAEAVA 2033

  Fly  1790 ----------------------------------------------------------------- 1789
                                                                             
Zfish  2034 EPAEAVAAPAEAVAAPPEAVAAPPEAVAAPVSADVSALAIVPVPAEGAAVGTPSQDEEEGVSDVE 2098

  Fly  1790 --------------------LLQKWQALPEIFRIPKRERIEQMKEHEREADRQQKHVHASTALED 1834
                                ||..|:.|.|::||||:.::|: :.::|..||:......:::...
Zfish  2099 SERSQEPQIRASDISDMAARLLDSWKDLKEVYRIPKKSQVEK-ESNDRSRDRESLMTPRTSSSSR 2162

  Fly  1835 QRERESSNDRFRQDRFR---------RDTTSSRIG-KPIRMSGNNTICTITTQQKGSNG-----A 1884
            :||||...:|.| ||.|         ||....|.| :|...|.:.      .:::||..     |
Zfish  2163 ERERERDKERDR-DRDRDWEREREWDRDRERDRDGERPTLRSADR------KRRRGSTSPLPPPA 2220

  Fly  1885 PDGMTRNDNRRRSDIGPPS-------EQRRTLSKELRRSLFERKVALDEAER------------- 1929
            .:...|||:  |.::...|       |.|..||.|.||.|||::||..||::             
Zfish  2221 YERSRRNDD--RYELSSSSKKKLHTKEARTKLSTEERRKLFEQEVAQREAQKQQQQQLQQQQQQQ 2283

  Fly  1930 -----------------------RVCTEDRLEHELRCEFFGADINTD-------PKQLPFYQKTD 1964
                                   :...:.:.:.:|:...|.....|.       |...|.....|
Zfish  2284 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQTLAFNPLAYTSSPNFMNYPPGYPIQTYVD 2348

  Fly  1965 -TNEWFNSDDVPVPAPP--------------RTELLTKALLSPDIDVGQG--ATDVEY-----KL 2007
             ||.  |:..|.:|.||              :...|...:.||.....|.  |:.:.:     :|
Zfish  2349 PTNP--NAGKVLLPTPPVEPICVTPAAGTFEQPPALDLGIASPSSTTTQAGPASSLAHIPAPLEL 2411

  Fly  2008 PPG-----VDPLPPAWNWQVTSDGDIYYYNLRERISQWEPPSPEQRLQTLLEENTTQQPLHELQI 2067
            ..|     |.|..||      .|..:...::..:.:  .|..|.|:..|.|.:..|||.: .:|.
Zfish  2412 SSGTQTQFVQPAVPA------QDPSVAVLSVPAQAA--SPQIPSQQGYTTLWDPNTQQAV-TVQT 2467

  Fly  2068 DPAVLENELIQVDTDYVGSLSAKSLAQYIEAKVRERRDLRRSKLVSIRLISPRRDEDRLYNQLES 2132
            .|           |....:.|....|.|.:.:..:       .:.||....|:.      |....
Zfish  2468 QP-----------TQQYSTTSQPQAAIYYQGQPCQ-------TIYSIPAGYPQT------NPPVI 2508

  Fly  2133 RKYKENKEKIRRRKELYRR-------------RKIEVLPDAVDEIPVPG----KALPIQP-YLFS 2179
            :.|.|........:::|.:             ::..::|:.:.::|.|.    |.:.:.| :..:
Zfish  2509 QAYTEPAANYLHSQQVYTQGGTVTTIVTSQPVQQEMIVPNNIIDLPPPSPPKPKTIILPPSWKVA 2573

  Fly  2180 SDEEE--------TKVAAIEQPAAEEEQDSLNMAPSTSHAAMAALGKAVAQPTGLGTVGKRKLPM 2236
            .|.|.        |:....:.|:    .|......|..|.|...||    .||            
Zfish  2574 RDPEGRIYYYHIITRQTQWDPPS----WDGTTEEASVEHEAEMDLG----TPT------------ 2618

  Fly  2237 PPSVTVKKHRQEQRSK-KVKSSQSPLTATSAREAHEKFRFEISGHVANFLRPYRKESCTLGRITS 2300
                     ..|..|| ..|::::..::..|:::.|.||.|:|..:...|.||||..|.||||::
Zfish  2619 ---------YDENPSKFSTKTAEADTSSELAKKSKEVFRKEMSQFIVQCLNPYRKPDCKLGRISN 2674

  Fly  2301 DEDYKFLVNRLSYHITTKEMRYCEVSGNP--LSCTESVKHKSYDFINQYMRQKGPVYKKPAEN 2361
            .||:|.|..:|::.:..||::.|:   ||  |.|.|:||||:.::|.:||::.|.|| :|.|:
Zfish  2675 TEDFKHLARKLTHGVMNKELKSCK---NPEDLECNENVKHKTKEYIKKYMQKFGSVY-RPKED 2733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795 28/55 (51%)
SET 1414..1533 CDD:214614 66/118 (56%)
PostSET 1535..1551 CDD:214703 8/15 (53%)
WW 2014..2043 CDD:278809 3/28 (11%)
SRI 2270..2348 CDD:285448 33/79 (42%)
setd2XP_009290459.1 AWS 1328..1382 CDD:197795 28/53 (53%)
SET 1383..1506 CDD:214614 67/122 (55%)
WW 2566..2595 CDD:278809 4/28 (14%)
SRI 2642..2721 CDD:285448 33/81 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 138 1.000 Domainoid score I4828
eggNOG 1 0.900 - - E2759_KOG4442
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D507784at2759
OrthoFinder 1 1.000 - - FOG0002762
OrthoInspector 1 1.000 - - oto40815
orthoMCL 1 0.900 - - OOG6_102278
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6254
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.680

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