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Protein Alignment Set2 and Setmar

DIOPT Version :9

Sequence 1:	NP_572888.2	Gene:	Set2 / 32301	FlyBaseID:	FBgn0030486	Length:	2362	Species:	Drosophila melanogaster
Sequence 2:	NP_848478.2	Gene:	Setmar / 74729	MGIID:	1921979	Length:	309	Species:	Mus musculus

Alignment Length:	183	Identity:	66/183 - (36%)
Similarity:	96/183 - (52%)	Gaps:	26/183 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly  1387 MIECGPLCSNGARCTNKRFQQHQCWPCRVFRTEKKGCGITAELLIPPGEFIMEYVGEVIDSEEFE 1451
            :.||..||..|.||.|:..|....:..:||:|||||.|:.....||.|.|:.||.|||:...|.:
Mouse   116 VFECNVLCQCGMRCRNRVVQNGLHFLLQVFQTEKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQ 180

  Fly  1452 RRQHLY-SKDRNRHYYFMALRG--------EAVIDATSKGNISRYINHSCDPNAETQKWTVNGEL 1507
            ||.||. |.|.|   |.:|:|.        |..:|.|..|||.|::||||:||.......::..:
Mouse   181 RRIHLQTSHDSN---YIIAVREHIYSGQIMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSMV 242

  Fly  1508 -RIGFFSVKPIQPGEEITFDY--QYLRY--GRDAQR---------CYCEAANC 1546
             ::..|:.|.|.||||:::||  ::|..  .:|.::         |||.|.:|
Mouse   243 PKLALFAAKDILPGEELSYDYSGRFLNQVSSKDKEKIDCSPPRKPCYCGAQSC 295

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.