DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Set2 and Setd5

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:XP_006506740.1 Gene:Setd5 / 72895 MGIID:1920145 Length:1467 Species:Mus musculus


Alignment Length:1528 Identity:281/1528 - (18%)
Similarity:471/1528 - (30%) Gaps:520/1528 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VRDLLNKNRKAHKIQIEARIDSNPSTGHSQSGTTAASTSMSTATASAASASSAATVSRLFSM--- 138
            :||.:.||..          :|.|    :|||.:..::.:  ....:..||.|.....::|.   
Mouse     4 LRDPIKKNSS----------ESKP----AQSGFSRGNSPL--CCPESVEASPAVNEKSVYSTHNY 52

  Fly   139 ------------FEMSHQSLPPPPPPPTALEIFAKPRPTQSLIVAQVTSEPSAVGGAHPVQTMAG 191
                        :...:...||||.||      |.| |.|::|               |...:.|
Mouse    53 GTTQRHGCRGLPYADHNYGAPPPPTPP------ASP-PVQTII---------------PRSDLNG 95

  Fly   192 LP-PVTPRKRGRPRKSQLADAAIIPTVIVPSCSDSDTNSTSTTTS----NMSSDSGELPGFPIQK 251
            || ||..|                       |.||..:...|..:    .:|.|     ||.:..
Mouse    96 LPSPVEER-----------------------CGDSPNSEGETVPTWCPCGLSQD-----GFLLNC 132

  Fly   252 PKSKLRVSLKRLKLGGRLESSDSGNSPSSS---SPEVEPPALQDENAMDERPKQEQNLSRMVDAE 313
            .|.:.....|.::|..|.:.:.||...|::   ..|:.|..:                  :..|.
Mouse   133 DKCRGMSRGKVIRLHRRKQDNISGGDSSATESWDEELSPSTV------------------LYTAT 179

  Fly   314 ENSDSDSQIIFIEIETESPKGEEEQ-EEGRPVEVEPQDLIDIDMELAKQEPTPDPEEDLDEIMVE 377
            :::.:.   |.:.:....||..::. |:||...           :..|.:.:|...::|||...|
Mouse   180 QHTPTS---ITLTVRRTKPKKRKKSPEKGRAAP-----------KTKKIKNSPSEAQNLDENTTE 230

  Fly   378 VLSGPPSLWSADDEAEE----EEDATVQRATPP---------GKEPAAD-------SCSSAPRRS 422
            .......||:  |:.||    :..|.||.|...         ||....|       :|::....|
Mouse   231 GWENRIRLWT--DQYEEAFTNQYSADVQNALEQHLHSNKEFVGKPAILDTINKTELACNNTVIGS 293

  Fly   423 RRSAPLSGSSRQGKTLEETFAEIAAESSKQILEAEESQDQEEQHILIDLIEDTLSESEVTSSVSP 487
            :....|...:|             .:..::||.|..           ||..|||           
Mouse   294 QMQLQLGRVTR-------------VQKHRKILRAAR-----------DLALDTL----------- 323

  Fly   488 TIEHMVVEEVVVEENQLVDEADEILDSKQEFVIKKVFSESDNIAASLNKDIFEPKVETKATCGEV 552
                                   |::.:.:.::::.|        .:|...|:.           
Mouse   324 -----------------------IIEYRGKVMLRQQF--------EVNGHFFKK----------- 346

  Fly   553 VPRP-----------EMVTEDVYITEGIAATLEKSAVVTKPTTEMIAE----------TKLSDEV 596
             |.|           ||.. |.......|..:.:|.........|||:          :.::.:.
Mouse   347 -PYPFVLFYSKFNGVEMCV-DARTFGNDARFIRRSCTPNAEVRHMIADGMIHLCIYAVSAITKDA 409

  Fly   597 VIEPPLKDESDPKQTEVELPESKPAVNIPKSERILSAEVETTSSPLVPPECCTLESVSGPVLLET 661
            .:......|......:|:....|...|.|..:|..:|    ...||.||.  :..::........
Mouse   410 EVTIAFDYEYSNCNYKVDCACHKGNRNCPIQKRNPNA----AELPLPPPP--SFPTIGAETRRRK 468

  Fly   662 SLSTE---EKSNENVETTPLKTEAAKEDSPPAAPE--------EEASNSSEEPNFLLEDYESNQE 715
            :...|   |:.||..|..|       :..|...||        ||..|..|:|.      |..:|
Mouse   469 ARRKELELEQQNEVPEENP-------DPQPQEVPEKVTVSNEHEEVDNPEEKPE------EEEKE 520

  Fly   716 QVAEDEMMKCNNQKGQKQTPLPEMKEPEKPVAETVSKKEKAMENPARSSPAIVDKKVRAGEMEKK 780
            :..:|:    .|....::|......|......|::.|::|..:.|...|.:  |.::.....|..
Mouse   521 EATDDQ----ENSAHSRRTREDRKVEAIMHAFESLEKRKKRRDQPVEQSSS--DIEITTSSSEIV 579

  Fly   781 VVKSTKGTVPEKKMDSKKSCAAVTPAKQKESGKSAKEAILKKETEKEKSSAKLDSSSPNTLDKKG 845
            |.:.||...||.::.|..|..|: |:..:.:|.:.:.:....:...||...|...:.|:....|.
Mouse   580 VGEETKTAAPESEVSSPVSNVAI-PSTPQSTGVNTRRSSHAGDVAAEKPIPKPPPAKPSRPRPKS 643

  Fly   846 KDTAQWSPQLQTLPK----------------------SSTKPPQE--------------SAPSVI 874
            :.:...:...|.|.:                      :|..||:.              |.|:||
Mouse   644 RISRYRTSSAQRLKRQKQAIAQQAELSQAALEEGGSNNSVTPPEAGNTDSSGENRQLTGSDPTVI 708

  Fly   875 SKTTS--NQPA---PKEEQHAAKKGLSD---------------NSPPSVLKAKEKAVSGFVECDA 919
            |.|.|  |:.|   ||.:::...:.|:|               .:.|:||......:.|.:....
Mouse   709 SVTGSHVNRAASKYPKTKKYLVTEWLNDKAEKQECPVECPLRITTDPTVLATTLNMLPGLIHSPL 773

  Fly   920 M---------FKAMDLANAQLR--LDEKNKKKLKKVPTKVEAPPKVEPPTAVPVPGQKKSL--SG 971
            :         |.:..:...:.|  |.:......||...|......:...::||...:.:.|  |.
Mouse   774 ICTTPKHYIRFGSPFMPERRRRPLLPDGTFSSCKKRWIKQALEEGMTQTSSVPQETRTQHLYQSN 838

  Fly   972 KTSLRRNTVYEDSPNL-------------ERNSS-------------PSSDSAQAN-TSAGKLKP 1009
            :|| ..:::.:|:.:|             |:|.:             |||.|.... |:.|:..|
Mouse   839 ETS-NSSSICKDNADLLSPLKKWKSRYLMEQNITKLLQPLSPVTPPPPSSGSKSPQLTTPGQTHP 902

  Fly  1010 SKVKKKINPRRSTICEAAKDLRSSSSSSTP----------------------TREVA-------- 1044
            .  :::.....|.:......|.::|.|:||                      |...|        
Mouse   903 G--EEECRNGYSLMFSPITSLTTASRSNTPLQFELCHRKDLDLTKVGFPDSSTHSCADRPSLLNC 965

  Fly  1045 -----ASSP--VSTSSDSSSKRNGSKRTTSDLDGGSKLDQRRYTICEDRQPETAIP--------V 1094
                 ||.|  |.||......|:|....|. |....:..:..:.:.....|..|:|        .
Mouse   966 NHPDLASHPSVVPTSEAGFPSRSGDGPQTL-LRNSDQAFRTEFNLMYAYSPLNAMPRADGLYRGS 1029

  Fly  1095 PLTKRRFSMH----------------------------------------PKASANPLHDTLLQT 1119
            ||...|..:|                                        |.|..||.....:..
Mouse  1030 PLVGDRKPLHLDGGYCSPAEGFSSRYEHGFMKDLSRGSMSPGGERTCEGVPSAPQNPPQRKKVSL 1094

  Fly  1120 AGKKRGRKEGKESLSRQNSLDSSSSASQGA--------------------------PKKKALKSA 1158
            ...::.::|.||:....|....|.|.|.||                          |.||...|.
Mouse  1095 LEYRKRKQEAKENSGGGNDSSQSKSKSSGAGQGSSNSVSDTGAHGVQGSSAGTPSSPHKKFSPSH 1159

  Fly  1159 EILSAALLETES---SESTSSG------SKMSRWDVQTSPELEAANPFGDIAKFIEDGVNLLKRD 1214
            .  ||:.||..|   |..|||.      :..|||.|.||  :|.....|.|.|.:...|.:.:: 
Mouse  1160 S--SASHLEAVSPSDSRGTSSSHCRPQENISSRWMVPTS--VERLREGGSIPKVLRSSVRVAQK- 1219

  Fly  1215 KVDEDQRKEGQDEVKREADPEEDEFAQRVAN-METPATTPTPS--PTQSNPEDSASTTTVLKELE 1276
              .|.......:..::|:||.:.|..:.::: :...||..:||  ..|....||..|.: ...|:
Mouse  1220 --GEPSPTWESNITEKESDPADGEGPEPLSSALSKGATVYSPSRYSYQLLQCDSPRTES-QSLLQ 1281

  Fly  1277 TGGGVRRSHRIKQKPQGPRASQGRGVASVALAP 1309
            ......|.|        |..|.|....:.||.|
Mouse  1282 QSSSPFRGH--------PTQSPGYSYRTTALRP 1306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795
SET 1414..1533 CDD:214614
PostSET 1535..1551 CDD:214703
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
Setd5XP_006506740.1 SET_SETD5 292..441 CDD:380958 30/227 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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