DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and setd1ba

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_001038599.2 Gene:setd1ba / 567970 ZFINID:ZDB-GENE-050309-289 Length:1844 Species:Danio rerio


Alignment Length:1833 Identity:366/1833 - (19%)
Similarity:584/1833 - (31%) Gaps:577/1833 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EESGPPSNPSPVASRGRGRGRPPKVALSALGNTPPHINPSLKHADAEASPT--APEDQDSGQSEC 64
            :..|.|..|.|                   ..||  .:....::..:.:|.  |...:.||..:.
Zfish   300 QSQGTPHTPRP-------------------SGTP--FSQDSSYSSRQGTPAFQANRAESSGGYKS 343

  Fly    65 RRSSRKKIIKFDVRDLLNKNRKAHKIQIEARIDSNPSTGHSQSGTTAASTSM---------STAT 120
            ||...|      .:|..|:..:...:.           |.:|.|.|....|.         |.|.
Zfish   344 RRHETK------FQDAYNRRPERRYVH-----------GPTQRGNTEQPPSFKQHQPPEPPSPAF 391

  Fly   121 ASAASASSAATVSRLFSMF-------------------EMSHQSLPPPPPPPTALEIFAKPRPTQ 166
            .......::|.....:|.:                   |:.::..|..||||:...:..:.|||.
Zfish   392 THTPPPPTSANFKTAYSQYQPPIPQEYTVASYHQPVQRELDYRRPPQAPPPPSTDFLPVRDRPTT 456

  Fly   167 SLI-------VAQVTSEPSAVGGAHPVQT-------------------------------MAGLP 193
            ..|       ..|.|:.||:.....|..|                               |.|.|
Zfish   457 PPIPEPPPAPETQPTTPPSSTPEPCPSPTQESERNSLDSRIEMLLKPFLNERGDSDAEVRMDGSP 521

  Fly   194 ---------PVTPRKRGRPRKSQLADAAIIPTVIVPSCSDSD---------TNSTSTTTSNMSSD 240
                     |:.|::..||..:.|.|  |.||.: |...|.:         .||...:.:||.|.
Zfish   522 ISSSSSQLSPIPPQRPSRPSSTGLED--ISPTPL-PDSEDDEPIRGTASLLANSRGMSPTNMHSK 583

  Fly   241 S--GELPGFPIQKPKSKLRVSLKRLKLGGRLESSDSGNSPSSSSPEVEPPALQDENAMDERPKQE 303
            |  ||        |::             .::..|:|:..|....|:..         ||.|...
Zfish   584 SCVGE--------PRT-------------AIDKMDTGHQSSGEDMEISD---------DEMPGTP 618

  Fly   304 QNLSRMVDAEENSDSDSQIIFIEIETESPKGEEEQEEGRPVEVEPQDL--IDIDMELAKQEPTPD 366
               ....|.::|...:|.:..|:.....|.|...........:.|..|  ......|....|...
Zfish   619 ---IASGDCDKNIVVNSALSLIQTIPMPPPGFPPLPHAAGFPLPPHHLPHHSTVSHLPSHHPMLH 680

  Fly   367 PEED---LDEIMVEVLSGPPSLWSADDEAEEEEDATVQRATPPGKEP-AADSCSSA--------P 419
            |...   :..:.|::||..|.|.....:.:.:..:.:.::..|...| .|.|.:.|        |
Zfish   681 PLHSYGMMHFLPVDLLSSLPQLLQMPFQMQTQMLSRMAQSQHPYAYPYPAPSANPAAMPFGGPYP 745

  Fly   420 RRSRRSAPLSGSSRQGKTLEETFAEIAAESSKQILEA-----EESQDQEEQHILIDLIEDTLSES 479
            ..|..|||......|...|         .|..|...|     .|.|.::.....||.:...:.: 
Zfish   746 PLSVVSAPADTLHGQPWPL---------PSMPQFNPAVPPPGYEPQKEDPHKATIDGVLMAIVK- 800

  Fly   480 EVTSSVSPTIEHMVVEEVVVEENQLVDEADEILDSKQEFVIKKVFSESDNIAASLNKDIFEPKVE 544
            |:.:.:...:...:||.|...      :.||..| |||...|...:.   :.....||..:.:.:
Zfish   801 ELKAIMKKDLNRKMVEVVAFR------KFDEWWD-KQELSAKATLTP---VKTGEGKDEEKERAK 855

  Fly   545 TKATCGEVVPRPE---MVTEDVYITEGI-AATLEKSAVVTKPTTEMIAETKLSDEVVIEP--PLK 603
            .|.|....:|..:   :..|.:.:..|: ...|....|..|...|   .|..||...:.|  |:.
Zfish   856 PKETMSSHLPWNKGEGLGFEGMGLGIGLRGIRLPSFKVKRKQPPE---PTSTSDNKRVRPSTPVD 917

  Fly   604 DESDPKQTEVELPESKPAVNIPKSERILSAEVETTSSPLVPPECCT----LESVSGPVLLETSLS 664
            ||.:.:::|        .:......|:..|...:...|..|.|..:    .|..||..  |:|||
Zfish   918 DELEDEESE--------RMGRTDGSRVDPAGSSSKRRPARPLELDSEGEEEEETSGKE--ESSLS 972

  Fly   665 TEE--------------KSNENVETTPLKTEAAKEDSPPAAPEEEASNSSEEP------NFLLED 709
            ..|              |..|..:....::.:::.:|..::.:|.:|:||.:.      :....|
Zfish   973 DHEEEPVDDASERLSSGKDLEEEDEKKSESHSSESESSDSSDDEASSSSSSKSGSDSSGSESSSD 1037

  Fly   710 YESNQEQVAEDEMMKCNNQKGQKQTPLPEMKEPEKPVAET----------VSKKEKAMENPARSS 764
            |||:.|:..|:|         :::..:..|.:.|...|.|          .|.:|:.:|..|.|:
Zfish  1038 YESSSEEEEEEE---------EEEERIVGMDDEEDVDARTSTSSSTTSTSSSDEEEVVEVKAPST 1093

  Fly   765 PA---IVDKKVRAGEMEKKVVKSTKGTVPEKKMDSKKSCAAVTPAKQKE------SGKSAKEAIL 820
            |.   ..::....|.:|         .|.|.::|.|.|..::...|.:|      .|..|.|..:
Zfish  1094 PTGPPPEEEPNELGRLE---------AVDEAEIDHKPSMVSLIKTKVEEVRPPSPKGLPADELDV 1149

  Fly   821 KKET-----EKEKSSAKLDSSSPNTLDKKGKDTAQWSPQLQTLPKSSTK-----PPQESAPSVIS 875
            ..|.     :.|.|..::.:..|.|......|:.|     .|.||..|:     |..|....:.|
Zfish  1150 DLEVKIPVPKTEASLEEVGNLRPPTPTGSFADSDQ-----DTRPKIPTEDFPRTPGHEGPVPLES 1209

  Fly   876 KTTSNQPAPKEEQHAAKKGLSDNSPPSVLKAKEKAVSGFVECDAMFKAMDLANAQLRLDEKNKKK 940
            :||..:..|....|..........|.|:|...|                .|.:..:|        
Zfish  1210 ETTVPRSLPTPSMHLPLPPSHVPDPQSLLPPPE----------------TLPDMPVR-------- 1250

  Fly   941 LKKVPTKVEAP--------------PKVEPPTAVPV-PGQKKSLSGKTSLRRNTVYEDSPNLERN 990
             .::||:.:.|              .|::....||| ||....|:|.:.        .||::  .
Zfish  1251 -GRLPTEEDIPRTPGRDLMDRARGLGKLQSTDTVPVTPGSDTPLTGNSL--------SSPHI--L 1304

  Fly   991 SSPSSDSAQ-------------------------ANTSAGKLKPSKVKKKINPRRSTICEAAKDL 1030
            .||.|..||                         |..|||.....|...:|...:....|..  |
Zfish  1305 GSPFSYPAQSPVLSAGIPRTPGRDLTFAPAFPDSAGLSAGLPIHRKASSEILEEKPLFKEPL--L 1367

  Fly  1031 RSSSSSSTPTREVAASSPVSTSSDSSSKRNGSKRTTSDLDGGSKLDQRRYTICEDRQPETAIP-- 1093
            .:|..:|.|..  |||||..          |....|:.|                  ||.|:|  
Zfish  1368 SASPQASLPNN--AASSPFP----------GPPLPTASL------------------PEPALPPQ 1402

  Fly  1094 --VPLT-KRRFSMHPKASANPLHDT---LLQTAGKKRGRKEGKESLSRQNSLDSSSSASQGAPKK 1152
              .|.: :..|...||....|:.|.   |..|..||:        |.|..:             |
Zfish  1403 GSPPASIENSFPASPKELPVPMIDVPVPLDDTPSKKK--------LVRSKN-------------K 1446

  Fly  1153 KALKSAEILSAALLETESSESTSSGSKMSRWDVQTSPELEAANPFGDIAKFIEDGVNLLKRDKVD 1217
            |.::.:|.....|:|..|                 .|||...|.:.|:..               
Zfish  1447 KGIQDSEEPQVTLIEASS-----------------LPELPVNNQYPDLPS--------------- 1479

  Fly  1218 EDQRKEGQDEVKREADPEEDEFAQRVANMETPATTPTPSPTQSNPEDSASTTTVLKELETGGGV- 1281
                         |:..|||                 ..|..|..|:|...|.:.|..||...| 
Zfish  1480 -------------ESIKEED-----------------GEPAFSEKEESQVPTIIPKVEETSFYVE 1514

  Fly  1282 ------RRSHRIKQK----PQGPRASQGRGVASVALAPISMDEQLAELANI--EAINEQFLRSEG 1334
                  ||..|..|:    ...|.||..|    .:..|.|..|::..|.:|  :.|:|:.:|...
Zfish  1515 EPIQKTRRQRRGWQELLLSMHSPVASPRR----PSFMPRSDFEEMTILYDIWNDGIDEEDIRYLK 1575

  Fly  1335 LNTFQLL--------------------------------KENFYR-----CAR-----QVSQENA 1357
            :...::|                                ||:..|     |||     ::.:::.
Zfish  1576 ITYDKMLQQDNAHDWLNDTLWVHHPPTNMGSATGVKKKRKEDGIRDHVTGCARSEGYYKIDKKDK 1640

  Fly  1358 EMQCDCFLTGDEE-----------AQGHLSCGAGCINR------MLMIECGPLCSNGARCTNKRF 1405
            ....:......||           ||..:|..||...|      :....|.   |:..:....:|
Zfish  1641 MKYLNSSRLQSEEPDVDTQGKSIPAQPQVSTRAGSERRSEQRRLLSSFSCD---SDLLKFNQLKF 1702

  Fly  1406 QQHQCWPCRVFRTEKKGCGITAELLIPPGEFIMEYVGEVIDSEEFERRQHLYSKDRNRHYYFMAL 1470
            ::.:   .|..|:.....|:.|...|...|.::||||:.|.....:.|:..|..:.....|...:
Zfish  1703 RKKK---IRFCRSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRV 1764

  Fly  1471 RGEAVIDATSKGNISRYINHSCDPNAETQKWTVNGELRIGFFSVKPIQPGEEITFDYQYLRYGRD 1535
            ..:.:||||..||.:|:|||||:||...:..||..:.:|..:|.:||...||||:||:: ....:
Zfish  1765 DHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSRQPINVNEEITYDYKF-PIEDE 1828

  Fly  1536 AQRCYCEAANCRG 1548
            ...|.|.|.||||
Zfish  1829 KIPCLCGAENCRG 1841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795 11/68 (16%)
SET 1414..1533 CDD:214614 40/118 (34%)
PostSET 1535..1551 CDD:214703 7/14 (50%)
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
setd1baNP_001038599.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..58
RRM_SF 136..228 CDD:302621
RRM <144..>232 CDD:223796
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..288
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..562 54/302 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 838..871 5/35 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 890..1108 48/239 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1160..1341 42/220 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1367..1499 47/244 (19%)
N-SET 1556..1695 CDD:288597 22/141 (16%)
SET <1619..1844 CDD:225491 62/230 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1647..1678 7/30 (23%)
SET 1705..1828 CDD:214614 40/126 (32%)
PostSET 1828..1844 CDD:214703 7/14 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593901
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.870

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