DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and suv39h2

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_001016508.1 Gene:suv39h2 / 549262 XenbaseID:XB-GENE-852675 Length:406 Species:Xenopus tropicalis


Alignment Length:264 Identity:88/264 - (33%)
Similarity:115/264 - (43%) Gaps:64/264 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1325 INEQFLRSEGLNTFQLLKENFYRCARQVSQENAEMQC-DCFLTGDEEAQGHLSC---GAGCI--- 1382
            ||: :..|.|:||   |.|....|           .| |||       :|  .|   .||.:   
 Frog   168 IND-YKASPGVNT---LGEAIVGC-----------DCSDCF-------KG--KCCPTEAGVLFAY 208

  Fly  1383 --NRMLMI-------ECGPLCSNGARCTNKRFQQHQCWPCRVFRTEK-KGCGITAELLIPPGEFI 1437
              :|.:.|       ||...|..|..|.|:..|:...:...:|||:. :|.|:.....|....|:
 Frog   209 NEHRQIKIPPGRPIYECNSRCKCGPDCPNRVVQKGPPYSLCIFRTDNGRGWGVKTLQKIKKNSFV 273

  Fly  1438 MEYVGEVIDSEEFERRQHLYSKDRNRHYYFMALRGEA---VIDATSKGNISRYINHSCDPNAETQ 1499
            ||||||||.|||.|||...|  |.....|...|..||   .:||...||:|.::|||||||.:..
 Frog   274 MEYVGEVITSEEAERRGQQY--DSRGITYLFDLDYEADEFTVDAARYGNVSHFVNHSCDPNLQVF 336

  Fly  1500 KWTVNG---EL-RIGFFSVKPIQPGEEITFDYQYLRYG--------------RDAQRCYCEAANC 1546
            ...::.   .| ||..||.:.|:.|||:|||||....|              |....|.|.||.|
 Frog   337 NVFIDNLDVRLPRIALFSTRNIKAGEELTFDYQMKGSGDFSTDSIDMSPAKKRVRIACKCGAATC 401

  Fly  1547 RGWI 1550
            ||::
 Frog   402 RGYL 405

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795 17/67 (25%)
SET 1414..1533 CDD:214614 53/126 (42%)
PostSET 1535..1551 CDD:214703 7/16 (44%)
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
suv39h2NP_001016508.1 CHROMO 43..90 CDD:214605
Pre-SET 152..238 CDD:282838 24/93 (26%)
SET 246..369 CDD:214614 51/124 (41%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000250 257..259 0/1 (0%)