DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Set2 and PR-Set7

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_001247100.1 Gene:PR-Set7 / 41743 FlyBaseID:FBgn0011474 Length:691 Species:Drosophila melanogaster


Alignment Length:981 Identity:184/981 - (18%)
Similarity:299/981 - (30%) Gaps:383/981 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   587 IAETKLSDEVVIEPPLKDESDPKQTE-VELPESKPAVNIP--KSERILSAEVETTSSPLVPPECC 648
            :|...|.|:....|..||....|.|: .:|||:....:..  |:.|.:...:.|.|         
  Fly    38 VAGNLLEDQYFASPKRKDCRLMKVTQNGQLPEATMMAHNKDNKAGRTIGVPLATRS--------- 93

  Fly   649 TLESVSGPVLLETSLSTEEKSNENVETTPLKTEAAKEDSPPAAPEEEASNSSEEPNFLLEDYESN 713
                             :.::.||.    .|..||.:||......||..|...: ...|:|.|.|
  Fly    94 -----------------QTRTIENF----FKANAAAKDSQKTIHTEEQLNLGNQ-ELKLDDEELN 136

  Fly   714 QEQVAEDEMMKCNNQKGQKQTPLPEMKEPEKPVAETVSKKEKAMENPARSSPAIVDKKVRAGEME 778
            .:...:||::|..:::..:..|.                   |.|..|::...::|::::.    
  Fly   137 GQIKLDDEVLKLADKQINENLPF-------------------ADEVDAKAEQKLMDEELQQ---- 178

  Fly   779 KKVVKSTKGTVPEKKMDSKKSCAAVTPAKQ------KESGKSAKEAILKKETEKEKSSAKLDSSS 837
                     .|.|...|.....::.:|..|      :|..::.:...:||.||..:....|    
  Fly   179 ---------VVEELLFDGSSRASSNSPFYQHDMDVMQEIQQTPEIPHIKKVTEPLEGLGSL---- 230

  Fly   838 PNTLDKKGKDTAQWSPQLQTLPKSSTKPPQESAPSV----------ISKTTSNQPAPKEEQHAAK 892
                       |.:......|..|.:.....|..::          |.:|.:...:.|..:....
  Fly   231 -----------ADFQTHRSALRDSHSSTHSSSTDNIFLQEPVLTLDIDRTPTKASSIKINRSFEL 284

  Fly   893 KGLSDNSPPSVLKAKEKAVSGFVECDAMFKAMDLANAQLRLDEKNKKKLKKVPTKVEAPPKVEPP 957
            .|...:||||||.|   .::|                  |.::                      
  Fly   285 AGAVFSSPPSVLNA---CLNG------------------RFNQ---------------------- 306

  Fly   958 TAVPVPGQKKSLSGKTSLRRNTVYEDSP--NLERNSSPSSDSA-----QANTS--AGKLKPSKVK 1013
             .|.:.|||::|             |.|  :|:::.|.|.||.     .|||.  ||:       
  Fly   307 -IVSLNGQKEAL-------------DLPHFDLDQHDSSSCDSGVACGLTANTESPAGQ------- 350

  Fly  1014 KKINPRRSTICEAAKDLRSSSSSSTPTREVAASSPVSTSSDSSSKRNGSKRTTSDLDGGSKLDQR 1078
                |||             ...:||.| :...||:              :|...:.||      
  Fly   351 ----PRR-------------RKPATPHR-ILCPSPI--------------KTALKVTGG------ 377

  Fly  1079 RYTICEDRQPETAIPVPLTKRRFSMHPKASANPLHDTLLQTAGKKRGRKEGKESLSRQNSLDSSS 1143
               ||:....:     ||:       |:.|...|..|....|..|..|:..:             
  Fly   378 ---ICKVGSAD-----PLS-------PRKSPRKLPTTTAAVAACKSRRRLNQ------------- 414

  Fly  1144 SASQGAPKKKALKSAEILSAALLETESSESTSSGSKMSRWDVQTSPELEAANPFGDIAKFIEDGV 1208
                  ||.:|....::                         |..|..:......||...::|  
  Fly   415 ------PKPQAPYQPQL-------------------------QKPPSQQQQQQQDDIVVVLDD-- 446

  Fly  1209 NLLKRDKVDEDQRKEGQDEVKREADPEEDEFAQRVANMETPATTPTPSPTQSNPEDSASTTTVLK 1273
                    |:|           |.|.|:|..|...|..|.......|:...||   .|...|:||
  Fly   447 --------DDD-----------EGDDEDDVRALIKAAEERENQNKAPATANSN---KAGMKTMLK 489

  Fly  1274 ELETGGGVRRSHRIKQKPQGPRASQGRGVASVALAPISMDEQLAELANIE--------AINEQFL 1330
            ....        :.|.|.:||.    :|...:.||..:.:.::.:...:.        |:.|:::
  Fly   490 PAPV--------KSKTKSKGPT----KGQPPLPLAATNGNREMTDFFPVRRSVRKTKTAVKEEWM 542

  Fly  1331 RSEGLNTFQLLKENFYRCARQVSQENAEMQCDCFLTGDEEAQGHLSCGAGCINRMLMIECGPLCS 1395
            |.                   :.|...|.:||                 |...|..|        
  Fly   543 RG-------------------LEQAVLEERCD-----------------GLQVRHFM-------- 563

  Fly  1396 NGARCTNKRFQQHQCWPCRVFRTEKKGCGITAELLIPPGEFIMEYVGEVIDSEEFERRQHLYSKD 1460
                                    .||.|:.|:......||::||||::|...|...|:..|:.|
  Fly   564 ------------------------GKGRGVVADRPFKRNEFVVEYVGDLISIGEAAEREKRYALD 604

  Fly  1461 RNR---HYYFMALRGEAVIDAT-SKGNISRYINHSCDPNAETQKWTVNGELRIGFFSVKPIQPGE 1521
            .|.   .|||.....:..|||| ..|.:.|.||||...|..|:...:.....:...:...|:|||
  Fly   605 ENAGCYMYYFKHKSQQYCIDATVDTGKLGRLINHSRAGNLMTKVVLIKQRPHLVLLAKDDIEPGE 669

  Fly  1522 EITFDY 1527
            |:|:||
  Fly   670 ELTYDY 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795 6/51 (12%)
SET 1414..1533 CDD:214614 39/118 (33%)
PostSET 1535..1551 CDD:214703
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
PR-Set7NP_001247100.1 SET 566..676 CDD:279228 38/110 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467628
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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