DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and pps

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_001247075.1 Gene:pps / 41524 FlyBaseID:FBgn0082831 Length:2018 Species:Drosophila melanogaster


Alignment Length:2356 Identity:456/2356 - (19%)
Similarity:738/2356 - (31%) Gaps:859/2356 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 NSPSSSSPEVEPPALQ-DEN----------AMDERPKQEQNLSRMVDAEENSDSDSQIIFIEIET 329
            :|..:.:|...|.|.: |.|          :.|||.     :..::  ||.|.|...::.|...|
  Fly     3 SSVFTEAPSARPAAAEADSNLVVVYSKSGISFDERA-----IGNIM--EEKSISTISVVRITSPT 60

  Fly   330 ESPKGEEEQEEGRPVEVEPQDLIDIDMELAK-QEPTPDPEEDLDEIMVEVLSGPPSLWSADDEAE 393
            .|...:||.|     .:|         |||. .|...|.|.|.|.   ...||..:....|:..|
  Fly    61 PSMVDQEEDE-----RLE---------ELANFMETATDSELDSDN---GSQSGGDNASEMDEHDE 108

  Fly   394 E--------EEDATVQRATPP------GKEPAADSCSSAPRRSRRSAPLSGSSRQGKTLEETFAE 444
            |        ..|:|...|..|      |::|      .|.::.:|..|.......|..:|:.:|:
  Fly   109 ENHNTGDDNNSDSTETEADAPRTRKRVGRKP------KAIKKRKRRKPKERPQIVGLRVEQFYAD 167

  Fly   445 IAAE----SSKQILEAEESQDQEEQHILIDLIEDTLSESEVTSSVSPTIEHMVVEEVVVEENQLV 505
            ..|:    ::.::......:...|...|:::|.   ::...|...||              .||.
  Fly   168 NTADMVVKNALKLAGVSVYKRTAETDALMEVIR---NDHNYTPFTSP--------------EQLK 215

  Fly   506 D-EADEILDSKQEFVIKKVFSESDNIAASLN-----KDIFEPKVETKATCGEVVP-RPEMVTEDV 563
            : :.||.:..:.:...:|:..::......:|     :.|....|:.|.   :.:| :|..|.:  
  Fly   216 NHKRDEKMAMEMQAQSRKIIMQAPGSVKLINAKKRVQAIPLSPVQVKV---QRLPVKPHQVQQ-- 275

  Fly   564 YITEGIAATLE-KSAVVTKPTTEMIAETKLSDEVVIEPPLKDESDPKQTEVELPESKPAVNIPKS 627
                  ||.|: |..::.||               |..|             ||..||.:....|
  Fly   276 ------AAQLQPKVQLIRKP---------------IHSP-------------LPRQKPEIIANNS 306

  Fly   628 ERILSAEVETTSSPLVPPECCTLESVSGPVLLETSLSTEEKSNENVETTPLKTEAAKEDSPPAAP 692
               ::|.:..|.:|        ::.::.||........:.:|:::.|         :|::..|..
  Fly   307 ---VNARLRPTRAP--------VKVIAPPVQEYIEDDDDAQSSDSAE---------EENADKAYD 351

  Fly   693 EEEASNSSEEPNFLLEDYESNQEQVAEDEMMKCNNQKGQK---------QTP------------- 735
            .||.|..|:|    .::.:::::...:.:|...|.:...|         |||             
  Fly   352 SEEMSEESDE----FQESDNDRDSDMDFDMRHSNRRNPNKRKRVRKVVRQTPSKPMKPLPPPPTT 412

  Fly   736 ---LPEMK------EPEKPVAETVSKKEKAMENPA-----RSSPAIVDKKVRAGEMEKKVVKSTK 786
               .||:|      ||:.|....:.:.......||     |..|:....|:|.......|.:...
  Fly   413 PQHFPELKKRKEVLEPKAPQIGQIIQMPATKSVPAVFALGRGLPSTSFLKIRPTHQSLPVKRPPL 477

  Fly   787 GTVPEKKMDSKKSCAAVTPAKQKESGKSAKEAILKKETEKEK------------SSAKLDSSSPN 839
            .|.|..  .:.:...||...:...|.:..||.|:.|.....|            .:.....|||.
  Fly   478 PTTPAN--SNVRRMPAVQLGRIVNSPQEVKEIIINKNMASPKGVFTNLNTLLGEDNNAATKSSPV 540

  Fly   840 TLDKKGKDTAQWSPQLQTLPKSSTKPPQESAPSVISKTTSNQPAPKEEQHAAKKGL--------- 895
            .|    :..|..||   :.|:||..  |:.:|.|:       |.| .:.|...||.         
  Fly   541 PL----RHRAVMSP---STPRSSYN--QQMSPIVV-------PVP-AQAHTPSKGFMPIGVDTAQ 588

  Fly   896 SDNSPPS-VLKAKEKAVSGFVECDAMFKAMDLANAQLRLDEKNKKKL---------KKVPTKVEA 950
            |...|.. |::..:.:.....|.|   |.:||.|:.:: ||..|..|         :.:|..|:.
  Fly   589 SHKLPAQIVIETHQSSSELAAEND---KQLDLINSIVQ-DELLKSTLVEQPVVNADEDIPKLVKM 649

  Fly   951 ---------PPKVEPPTAV-PVP---GQKKSLSGKTSLRRNTVYEDSPN----------LERNSS 992
                     ||.|..||.: |.|   |...:.:...:...:|..||...          :|.:..
  Fly   650 LESTAADLDPPPVSLPTNIFPAPEMQGVGNAAAADPNNIMDTANEDEITADFLQHVVGLIEEDKQ 714

  Fly   993 PSSDSAQ---ANTSAGKL-----KPSKVKKKINPR---------RSTICEAAKDLRS-SSSSSTP 1039
            ..::..:   |:|..|.|     .|:.::....|:         .:::.|.|:.:.| ..:.|||
  Fly   715 FEAEVVKQVLASTEPGTLDAIVSMPTSIEPVDVPQVQAHTNLLPNASLTEPAQSMTSLPIACSTP 779

  Fly  1040 TREVAASSPVSTSS-----------------DSSSKRNG------SKRTTSDLDGG------SKL 1075
            :|.||||:|.:::.                 .:.:||..      ....||..|.|      |.|
  Fly   780 SRSVAASTPPTSAKVVRGYGRVIYLPPIEAPTTRAKRRAQFPSAPGMAATSSSDAGNLSFGESSL 844

  Fly  1076 DQRRYTICEDRQPETAIPVPLTKRRFSMHPKASANPLHDTLLQTAGKKRG---RKEGKESLSRQN 1137
            |             .:|..||.....|...:..:.|......:.:..:|.   |:..|...|:.|
  Fly   845 D-------------ASINQPLNTSSLSNDSQPGSGPKRPNPREPSMARRSTAPRRSKKLDASQNN 896

  Fly  1138 SLDSSSSASQGAPKKKALKSAEILSAALLETESSESTSSGSKMSRWDVQTSPELEAANPFGDIAK 1202
            ..|:|                          ||.|.....:|:  |.:...|.   .|.|.....
  Fly   897 DPDAS--------------------------ESQEDDDDPNKL--WCICRQPH---NNRFMICCD 930

  Fly  1203 FIED---GVNLLKRDKVDEDQRKEGQDE-----VKREADPEEDEFAQRVANMETPATTPTPSPTQ 1259
            ..||   |..:.....:..|...:|.|.     |||    :|:....|:.:|  ..|.||..|.|
  Fly   931 LCEDWFHGTCVGVTKAMGTDMENKGIDWKCPKCVKR----QEERSQPRITDM--LVTRPTTQPEQ 989

  Fly  1260 SNPEDSASTTTVLKELETGGGVRRSHRIKQ--KPQGPRASQGRGVASVALAPISMDEQLAELAN- 1321
            ...|....|||.              .|.|  .|..||.:. ..|.:||.:|:.:  .:|:.|. 
  Fly   990 RPSETKVLTTTA--------------EIVQVAAPSAPRRTL-PVVLTVASSPMRI--PMAKPAKK 1037

  Fly  1322 --IEAINEQFLRSEGLNTFQLLKENFYRCARQVSQENAEMQCDCFLTGDEEAQGHLSCGAGCINR 1384
              ..||:.|                      |..|.|                            
  Fly  1038 FPTGAISHQ----------------------QQQQLN---------------------------- 1052

  Fly  1385 MLMIECGPLCSNGARCTNKRFQQHQCWPC-RVFRTEKKGCGITAELLIPPGEFIMEYVGEVIDSE 1448
              .|..||  |.|     ||..:..|..| |...|....||         .|.|.:|....|.:.
  Fly  1053 --FIRLGP--SPG-----KRISETLCVVCKRPASTSSVYCG---------EECIRKYAQSAIQAH 1099

  Fly  1449 EFERRQHLYSKDRNRHYYFMALRGEAVIDATSKGNISR------YINHSCDPNAETQK------- 1500
                                         |.:||.:.:      .:|:|.|.....:|       
  Fly  1100 -----------------------------AATKGPLPQNAGAQSLLNNSFDAKKNKKKDLFEDVL 1135

  Fly  1501 ---WTVNGELRIGFFSVKPIQPGEEITFDYQYLRYGRDAQRCYCEAANCRGWIGGEPDSDEGEQL 1562
               .||:...||..|..|   .|..||        |..|.    .|...|.|:...|..   |.|
  Fly  1136 RQADTVSKVERINVFERK---SGRVIT--------GHMAP----SAHQFRKWLQENPSF---EVL 1182

  Fly  1563 DEESDSDAEMDEEELEAEPE----EGQPRKSAKAKAKSKLKAKL--------------------P 1603
            ...:...|:.::..|:..||    ..:|.....||...:..|||                    |
  Fly  1183 PSGTVQSADAEKRLLKGAPEAATSTSEPAVLGVAKKPPEGPAKLSHPQNTTVQASHQLGISSVRP 1247

  Fly  1604 LATGRKRKEQT-----KPKDREYKAGRWLKPSATGSSSSAE-------KPPKKPKVNKFQAMLED 1656
            ||  :|.||:|     .|......||: .:|...|...|..       |..:..:.|..|...:.
  Fly  1248 LA--KKDKEKTTPTVQAPTPNRIAAGK-PEPVRIGIRRSLREQLLARIKEAQAAEENSGQPTTQW 1309

  Fly  1657 PDVVE--------ELSLLRRGG-----------------LKNQQDTLRFSRCLVRAKLLKTRLAL 1696
            |.|:|        ||.:....|                 :|::::...|.:  :.||.::.| .|
  Fly  1310 PTVLEVDQFVKNVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEK--ICAKQVEPR-QL 1371

  Fly  1697 LRVLTHGELPCRRLFLDYHGLRLLHAWISENGND--DQLREALLDTLESLPIPNRTMLSDSRVYQ 1759
            :| :|..:|..:.          |..|..|....  |.::::.||.|...              |
  Fly  1372 VR-MTPEQLASQE----------LAKWREEENRHQLDMIKKSELDLLACA--------------Q 1411

  Fly  1760 SVQLWSNSLEQQLA-----VVPQEK----QAALHKRMVALLQKWQALPEIFRIPKRERIEQMKEH 1815
            :..:.::..|:.:|     .:|:|.    .:....:..:|:.: .:...:.|...||:....|| 
  Fly  1412 NYVVKTHKGEEVIATKVDVTLPEENVSEASSMADTKQTSLVSE-PSTSTLERSTSREKAGSSKE- 1474

  Fly  1816 EREADRQQKHVHASTALEDQRERESSNDRFR--QDRFRRDTTSSRIGKPIRMSGNNTICTITTQQ 1878
              :..:..||.|.      :|.|..||.|.|  ..|.||                         |
  Fly  1475 --KRHKSHKHHHR------KRSRSRSNSRGRSVDKRHRR-------------------------Q 1506

  Fly  1879 KGSNGAPDGMTRNDNRRRSDIGPPSEQRRTLSKELRRSLFERKVALDEAERRVCTEDRLEHELRC 1943
            ....|...|....::|.|             .|:.|    ||    ||..               
  Fly  1507 HNEGGEQPGSGEREHRSR-------------EKQSR----ER----DEIV--------------- 1535

  Fly  1944 EFFGADINTDPKQLPFYQKTDTNEWFNSDDVPVP---APPRTEL----LTKALLSPDIDVGQGAT 2001
                      |..||  :|.|.|     |..|||   |..:||.    |...:|..:..|.|.|.
  Fly  1536 ----------PSPLP--KKRDEN-----DQSPVPKKTAEKKTEASAYNLVDQILESEKTVEQAAN 1583

  Fly  2002 DVEYKLPPGVDPLP----------PAWN-------------WQVT------SDGDIYYYNLR--- 2034
            ..:.|  |...|||          |..|             |..|      :|.:|..|.::   
  Fly  1584 LGKPK--PSPKPLPTLPSSLKAPEPMDNYSRYLHGLTTSSLWSGTLKMIDLADFEIVMYPVQGNC 1646

  Fly  2035 -----------------ERISQWE-------------------PPSPEQ--RLQTLLEENTTQQP 2061
                             .|::.||                   |.||.:  :.....|...::|.
  Fly  1647 HQLGNLMPSQMDVIGRITRVNVWEYIKKLKKSPTKEVVIVNIFPASPSETYKFDLFFEYLDSRQR 1711

  Fly  2062 LHELQIDPAVLENELIQVDTDYVGSL-----------SAKSLAQYIEAKVRERRDLRRSKLVSI- 2114
            |..|.:|..       |:...|:..|           :|:.:..|.||:       |.:.|:.| 
  Fly  1712 LGVLGVDSD-------QIRDFYIFPLGSGDKLPPALQTAEPVPFYEEAQ-------RPNTLLGII 1762

  Fly  2115 -RLISPRRDEDRLYN---------QLESRKYKENKEKIRRRKELYRRRKI----------EVLPD 2159
             |.:| :|..|.:.:         .|.|:..|.::..|....:...:|||          |...|
  Fly  1763 VRCLS-KRPADAVPSTPSVPTPVPALSSKVAKRSRSSISYPAQSSPKRKISTHSTSSKDDEFDID 1826

  Fly  2160 AVDEIP-----------VPGKALP---IQPYLFSSDEEETKVAAIEQPAAEEEQ-DSLNMAPSTS 2209
            |:.:.|           ||..::|   .:||.....::|...:|.::|...|.| :.:|...:..
  Fly  1827 AIIKAPIAKLQKTAPKVVPQPSVPNDADEPYSPGGSDDELVPSAPQRPNDLERQVNEINKQIAAQ 1891

  Fly  2210 HAAMAALGKAVAQPTG 2225
            ...:|.|.|  .:|||
  Fly  1892 QMEIAGLLK--VEPTG 1905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795 7/51 (14%)
SET 1414..1533 CDD:214614 24/134 (18%)
PostSET 1535..1551 CDD:214703 4/15 (27%)
WW 2014..2043 CDD:278809 12/96 (13%)
SRI 2270..2348 CDD:285448
ppsNP_001247075.1 TNG2 <827..965 CDD:227367 33/181 (18%)
PHD_PHF3_like 914..963 CDD:277027 10/51 (20%)
BRK 1142..1186 CDD:197800 15/61 (25%)
TFIIS_M 1274..1396 CDD:284835 24/135 (18%)
SPOC 1623..1729 CDD:285043 18/112 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
11.030

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