DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and CG4565

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_001097743.1 Gene:CG4565 / 41303 FlyBaseID:FBgn0037841 Length:269 Species:Drosophila melanogaster


Alignment Length:283 Identity:73/283 - (25%)
Similarity:116/283 - (40%) Gaps:65/283 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1312 MDEQLAELA---------NIEAINEQFLR-SEGLNTFQLLKENFYR-----CARQVSQENAEMQC 1361
            |||  :|.|         .::.|.|..|. |:|...|:.|.:.:..     |..:.:.||:|:  
  Fly     1 MDE--SETAPNDDYEHPDGLDYILESVLMPSDGSKEFKFLADEYNSVLLNPCHCKGACENSEV-- 61

  Fly  1362 DCFLTGDEEAQGHLSCGAGCINRML---MIECGPLCS---NGARCTNKRFQQHQCWPCRVFRTE- 1419
             |...|..|   ....|:..|.|..   :|||..:|.   |  .|:|:...........:|.:. 
  Fly    62 -CAHGGQYE---FTEDGSELILRNSANPVIECNDMCKCCRN--TCSNRLVYSGPRKHLEIFDSPV 120

  Fly  1420 --KKGCGITAELLIPPGEFIMEYVGEVIDSEEFERRQH---------------LYSKDRNRHYYF 1467
              .||...||:  |..|.:|.||.||::...|...|.|               .|:.|:.:..  
  Fly   121 YGSKGLRTTAK--ITKGGYICEYAGELLTVPEARSRLHDNEKLGLMNYILVLNEYTSDKKQQV-- 181

  Fly  1468 MALRGEAVIDATSKGNISRYINHSCDPNAETQKWTVNGEL-RIGFFSVKPIQPGEEITFDY---- 1527
                  .::|.:.:|||.||:||||:||.......::..: :||.|:.:.|...||:.|.|    
  Fly   182 ------TIVDPSRRGNIGRYLNHSCEPNCHIAAVRIDCPIPKIGIFAARDIAAKEELCFHYGGEG 240

  Fly  1528 QYLRYGRDAQRCYCEAANCRGWI 1550
            ||.:. ...:.|.|.|:.|.|::
  Fly   241 QYKKM-TGGKTCLCGASKCTGFM 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795 14/57 (25%)
SET 1414..1533 CDD:214614 39/141 (28%)
PostSET 1535..1551 CDD:214703 5/16 (31%)
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
CG4565NP_001097743.1 Pre-SET 10..103 CDD:282838 23/100 (23%)
SET 111..239 CDD:214614 37/137 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467627
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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