DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Set2 and Kmt2d

DIOPT Version :10

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:XP_017172163.1 Gene:Kmt2d / 381022 MGIID:2682319 Length:5608 Species:Mus musculus


Alignment Length:1835 Identity:354/1835 - (19%)
Similarity:549/1835 - (29%) Gaps:740/1835 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 PTALEIFAKPRPTQSLIVAQVTSEPSAVGGAHPVQTMAGLPPVTPRKRGRPRKSQLADAAIIPTV 217
            ||.|....:....::.:.::||..||...|..|....|..|                 .::.|..
Mouse  4076 PTLLLTGKEQNNAETALPSEVTEGPSTHQGGPPAVGTAPEP-----------------MSVEPGE 4123

  Fly   218 IVPSCS-DS-----DTNSTSTTTSNMSSDSGELPGFPIQKPKSKLRVSLKRLKLGGRLESSDSGN 276
            :.||.| ||     .:.:.|..||........|||.|  :|:..|..:     .||.......|:
Mouse  4124 VKPSISGDSQLLLVQSQAQSQATSVQLQPPLRLPGQP--QPQVNLLHT-----AGGGSHGQQLGS 4181

  Fly   277 SPSSSSPEVEPPALQDENAMDERP----------KQEQNLSRMVDAEENSDSDSQIIFIEIETES 331
            ..||.||.|.....|...::.|:|          :|...|.|.:  :.|:.|           :.
Mouse  4182 GSSSESPAVPHLLAQPSVSLGEQPGPMAQNLLGSQQPLGLDRPI--QNNTGS-----------QP 4233

  Fly   332 PKGEEEQEEGR------------PVEVEPQDLIDIDMELAKQEPTPDPEEDLDEIMVEVLSGPPS 384
            ||.....:.|:            .:..:.|.::..:.:|  :..:|..::.|..::::       
Mouse  4234 PKSGPAPQSGQGPPGAGVMPTVGQLRAQLQGVLAKNPQL--RHLSPQQQQQLQALLMQ------- 4289

  Fly   385 LWSADDEAEEEEDATVQRATPPGKEPAADSCSSAPRRSRRSAPLSG-----SSRQGKTLEET--F 442
                    .:.:.:...|.|||.:||..           :.:||.|     ....|.::.:|  .
Mouse  4290 --------RQLQQSQAVRQTPPFQEPGT-----------QPSPLQGLLGCQPQPGGFSVSQTGPL 4335

  Fly   443 AEIAAESSKQILEAEESQDQEEQHILIDLIEDTLSESEVTSSVSPTIEHMVVEEVVVEENQLVDE 507
            .|:.|.|..|            ....:.:.:..||...|.....||...                
Mouse  4336 QELGAGSRPQ------------GPPRLPVPQGALSTGPVLGPAHPTPPP---------------- 4372

  Fly   508 ADEILDSKQEFVIKKVFSESDNIAASLNKDIFEPKVETKATCGEVVPRPEMVTEDVYITEGIAAT 572
                 .|.||   .|..|:..:.:|.|          |....|  .|:|          :|.|..
Mouse  4373 -----SSPQE---PKRPSQLPSPSAQL----------TPTHPG--TPKP----------QGPALE 4407

  Fly   573 LEKSAVVTKPTTEMIAETKLSDEVVIEPPLKDESDPKQTEVELPESKPAVNIPKSERILSAEVET 637
            |....|  .|....:|:|.....  :.|  .|.|| ..||.:.||                    
Mouse  4408 LPPGRV--SPAAAQLADTFFGKG--LGP--WDPSD-NLTEAQKPE-------------------- 4445

  Fly   638 TSSPLVPPECCTLESVSGPVLLETS-LSTEEKSNENVETTPLKTEAAKEDS---PPAAPEEE--- 695
             .|.|||..   |:.|:|.|:.|.| ||.:::..|  |...|..:..|.::   |..||...   
Mouse  4446 -QSSLVPGH---LDQVNGQVVHEPSQLSIKQEPRE--EPCALGAQTVKREANGEPAGAPGTSNHL 4504

  Fly   696 --ASNSSEEPNFLLEDYESNQEQVAEDEMMKCNN-QKGQKQTPL-----------PEMKEPEKPV 746
              |.:.||..:.||:            ::::..| |.|..:.|.           .::...|:.:
Mouse  4505 LLAGSRSEAGHLLLQ------------KLLRAKNVQLGAGRGPEGLRAEINGHIDSKLSGLEQKL 4557

  Fly   747 AETVSKKE-KAMENPARSSPAIVDKKVRAGEMEKKVVKSTKGTVPEKKMDSKKSCAAVTPAKQKE 810
            ..|.|.|| .|...|..:.|              |.|:.|...:|..:   ||        .:||
Mouse  4558 QGTSSNKEDAATRKPLPAKP--------------KRVQKTSDRLPSSR---KK--------LRKE 4597

  Fly   811 SGKSAKEAILKKETEKEKSSAKLDSSSPNTLDKKGKDTAQWSPQLQTLPKSSTKPPQESAPSVIS 875
            .|..|.||:||                            |...:|..||.:.        |::.:
Mouse  4598 DGVRANEALLK----------------------------QLKQELSQLPLTE--------PTITA 4626

  Fly   876 KTTSNQPAPKEEQHAAKKGLSDNSPPSVLKAKEKAVSGFVECDAMFKAMDLANAQLRLDEKNKKK 940
            ..:...|...                ..|.:.:..:.|.....|:....|..:..|     .|..
Mouse  4627 NFSLFAPFGS----------------GCLVSGQSQLRGAFGSGALHTGPDYYSQLL-----TKNN 4670

  Fly   941 LKKVPTKVEAPPKVEPPTAVPVPG-QKKSLSGKTSLRRNTVYEDSPNLERNSSPSSDSAQANTSA 1004
            |...||    ||...|||  |.|. |:|.::|.|           |:.|....| .|:|.|..|.
Mouse  4671 LSNPPT----PPSSLPPT--PPPSVQQKMVNGVT-----------PSDELGERP-KDTASAQDSE 4717

  Fly  1005 GKLKPSKVKKKIN--------PRRSTICEAAKDLR--SSSSSSTPTREVAASSPVSTSSDSSSK- 1058
            |.|:.:...|.::        |...|     :|:|  |...|.:|...|.||||.|...:.:.: 
Mouse  4718 GALRDAAEVKSLDLLAALPTPPHNQT-----EDVRMESDEDSDSPDSIVPASSPESILGEEAPRF 4777

  Fly  1059 -RNGSKRTTSDLDGGSKLDQRRYTICEDRQPETAIPV-PLTKRRFSMHPKASANPLHDTLLQTAG 1121
             :.||        |..:.|.|..:......|.|.||| |.||            |.....|:..|
Mouse  4778 PQLGS--------GRWEQDNRALSPVIPIIPRTGIPVFPDTK------------PYGVLDLEVPG 4822

  Fly  1122 K------KRGRKEGKE-------SLSRQNSLDSSSSASQGAPKKKALKSAEIL-----SAALLET 1168
            |      ::|:  |.|       |.:...:|:....|.......|...|.|:|     :.|.||.
Mouse  4823 KLPATAWEKGK--GSEVSVMLTVSAAAAKNLNGVMVAVAELLSMKIPNSYEVLFPDGPARAGLEP 4885

  Fly  1169 ESSESTSSGSK---MSRWDVQTSP----ELEAANPFGDIAKFIEDGVNLLKRD------------ 1214
            :..|:...|.|   :|.....|.|    :.:|..| |...|...|.::|||::            
Mouse  4886 KKGEAEGPGGKEKGLSGKGPDTGPDWLKQFDAVLP-GYTLKSQLDILSLLKQESPAPEPSIQHSY 4949

  Fly  1215 -----KVDEDQRKEGQDEVKREADPEEDEFAQRVAN----------METPATTPTPS--PTQSNP 1262
                 .:|..|......|   |..|.....|...|:          .|.||..|.||  |..|:|
Mouse  4950 TYNVSNLDVRQLSAPPPE---EPSPPPSPLAPSPASPPAEPMVELQAERPAEPPIPSPLPLASSP 5011

  Fly  1263 EDSA---------------------------STTTVLKELETGGGVRRSHR-----IKQ-----K 1290
            |.:.                           ....:|..::.|.|.:...|     ::|     :
Mouse  5012 ESARPKPRARPPEESEDSRPPRLKKWKGVRWKRLRLLLTIQKGSGHQEDEREVAEFMEQFGTALR 5076

  Fly  1291 P---------------QGPRASQG----------------------------------------R 1300
            |               :|..|:.|                                        |
Mouse  5077 PSKVPRDNRRCCFCHEEGDGATDGPARLLNLDLDLWVHLNCALWSTEVYETQGGALMNVEVALHR 5141

  Fly  1301 GVAS---------------------------------------VALAPI-----SMDEQLAELA- 1320
            |:.:                                       ..|.|:     ..:::|:..| 
Mouse  5142 GLLTKCSLCQRTGATSSCNRMRCPNVYHFACAIRAKCMFFKDKTMLCPVHKIKGPCEQELSSFAV 5206

  Fly  1321 ---------NIEAINEQFLRSEGLNTF-----------QLLKENF-------------------- 1345
                     .::.|.....|.|.|:.|           |||....                    
Mouse  5207 FRRVYIERDEVKQIASIIQRGERLHMFRVGGLVFHAIGQLLPHQMADFHSATALYPVGYEATRIY 5271

  Fly  1346 -----------YRCARQVSQEN-----------------------------------AEMQCDC- 1363
                       |||:  :|:.|                                   |.|:.:. 
Mouse  5272 WSLRTNNRRCCYRCS--ISENNGRPEFVIKVIEQGLEDLVFTDASPQAVWNRIIEPVAAMRKEAD 5334

  Fly  1364 -------FLTGD--------------EEAQGHLSC--------------------GAGC------ 1381
                   :|.|:              |...|..||                    ..||      
Mouse  5335 MLRLFPEYLKGEELFGLTVHAVLRIAESLPGVESCQNYLFRYGRHPLMELPLMINPTGCARSEPK 5399

  Fly  1382 --------------------------INRMLMIECGPLCSNGARCT--NKRFQQHQCWPCRVFRT 1418
                                      :|...|.:.......|...|  :|:|...:....|..||
Mouse  5400 ILTHYKRVFTSIISFDPHNNLMRPHTLNSTSMSKAYQSTFTGETNTPYSKQFVHSKSSQYRRLRT 5464

  Fly  1419 EKK-----------GCGITAELLIPPGEFIMEYVGEVIDSEEFERRQHLYSKDRNRHYYFMALRG 1472
            |.|           |.|:.|...:.....::||:|.:|.:|...||:.:| :::||..|...:..
Mouse  5465 EWKNNVYLARSRIQGLGLYAAKDLEKHTMVIEYIGTIIRNEVANRREKIY-EEQNRGIYMFRINN 5528

  Fly  1473 EAVIDATSKGNISRYINHSCDPNAETQKWTVNGELRIGFFSVKPIQPGEEITFDYQYLRYGRDAQ 1537
            |.|||||..|..:|||||||.||...:..|.:.|.:|...|.:.|..|||:|:|||: .:..|..
Mouse  5529 EHVIDATLTGGPARYINHSCAPNCVAEVVTFDKEDKIIIISSRRIPKGEELTYDYQF-DFEDDQH 5592

  Fly  1538 R--CYCEAANCRGWI 1550
            :  |:|.|.|||.|:
Mouse  5593 KIPCHCGAWNCRKWM 5607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 valS <709..832 CDD:237855 26/135 (19%)
AWS 1358..1410 CDD:197795 15/127 (12%)
SET_SETD2 1410..1551 CDD:380949 55/154 (36%)
WW 2014..2043 CDD:459800
SRI 2266..2355 CDD:462404
Kmt2dXP_017172163.1 ePHD1_KMT2D 134..217 CDD:277165
PHD1_KMT2C_like 228..273 CDD:276984
PHD_SF 275..320 CDD:473978
PHA03247 <492..883 CDD:223021
PHD3_KMT2D 1335..1385 CDD:277072
PHD5_KMT2C_like 1386..1432 CDD:276988
PHD5_KMT2D 1463..1513 CDD:277074
HMG-box_KMT2D 1956..2039 CDD:438836
PHA03247 <2071..2637 CDD:223021
Med15 <4104..>4407 CDD:312941 75/425 (18%)
ePHD2_KMT2D 5087..5193 CDD:277168 7/105 (7%)
FYRN 5236..5287 CDD:461787 6/52 (12%)
FYRC 5295..5382 CDD:197781 8/86 (9%)
SET_KMT2D 5453..5607 CDD:380986 54/155 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.