DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and set-25

DIOPT Version :10

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_499738.3 Gene:set-25 / 3565129 WormBaseID:WBGene00012802 Length:714 Species:Caenorhabditis elegans


Alignment Length:715 Identity:149/715 - (20%)
Similarity:254/715 - (35%) Gaps:163/715 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   936 KNKKKLKKVPT-KVEAPPKVEPPTAVPVPGQKKSLSG----KTSLRRNTVYEDSPNLER----NS 991
            :.:::.:.|.| |.|.||:......     |::.:|.    ::|...|.:.:..|.:.|    ..
 Worm    56 QKRRRSESVRTLKPECPPEETQRLR-----QRRRISATDATQSSRTMNVIEDRKPRVNRARKSQD 115

  Fly   992 SPSSDSAQANTSAGKLKPSKVKKKINPRRST----ICEA--AKDLRSSSSSSTPTREVAASS--- 1047
            :||:.:....|..|..:.||......|.:.:    |.||  :|.:.:||.....|.:.|.:.   
 Worm   116 APSTSTCGFETPVGTKRKSKAADSQKPPKQSKLRKIDEASTSKAVDNSSKDGKKTTKPAVTQSNR 180

  Fly  1048 ----------PVSTSSDSSSKRNGSKRTTSDLDGGSKLDQRRYTICEDRQPETAIPVPLTKRRFS 1102
                      |:.|....||.|..|....:|:....::::..      :.|...:.:||      
 Worm   181 RRSGLSLRPVPIETIFSESSGRESSTEDEADVSHQQRVEKIA------KNPIMVVVLPL------ 233

  Fly  1103 MHPKASANPLHDTLLQTAGKKRGRKEGKES--LSRQNSLDSSSSASQGAPKKKALKSAEILSAAL 1165
             .|....|....|::.|. |.|..|...|:  ..|..|......|..|.|.||..|         
 Worm   234 -GPGNYPNNERITVVSTY-KSRVNKNCNEARRAQRHGSWSRKGIAFPGIPTKKFTK--------- 287

  Fly  1166 LETESSESTSSGSKMSRWDVQTSPELEAANPFGDIAKFIEDGVNLLK------------------ 1212
                 |:....|:..|.|..|.:...|.    |.|..:.|....|..                  
 Worm   288 -----SDLAKYGAHASNWPAQAAFRSEE----GKILIYYEGWTCLTLHRLSVEECARTAPTILEE 343

  Fly  1213 ---RDKVDEDQRKEGQDEVKREADPEEDEFAQRVANMETPATTPTPSPTQSNPEDSASTTTVLKE 1274
               |||..|..:....:|.|...:..::...:...:.........|.| ||:||   :...:.::
 Worm   344 MSIRDKFIETVKSAAAEEAKLVVEKNQENGIELTLDEALKQIFIEPVP-QSSPE---NVFWIYQD 404

  Fly  1275 LETGGGVRRSHRIKQKPQGPRASQGRGVASVALAPISMDEQLAE-------------LANIEAIN 1326
            |.      ..|.:..:..|             |||:.......:             :.:::|..
 Worm   405 LS------YFHTMDNRDLG-------------LAPVFYISSYTQSVRPPCYAYTAINIVDVDAYK 450

  Fly  1327 EQFLRSEGLNTFQLLKENFYRCARQVSQEN-AEMQCDC---FLTGDEEAQGHLSCGA-GCI---- 1382
            ........::...|..:..:...|..:.|| .:.:||.   ||. |.....:|.|.. |.:    
 Worm   451 RCLESRANMSFADLTGQKIWMPTRSKACENGTKCKCDARFMFLY-DPHDVTNLECTPDGKVDFTD 514

  Fly  1383 ----NRMLMIECGPLCSNGARCTNKRFQQHQCWPCRV-FRTEKKGCGITAELLIPPGEFIMEYVG 1442
                |..:::||...|.....|..:..|:.|..|..| :...:||.|:.|...|..||.:.||.|
 Worm   515 FKIDNARIVMECSDACGCSLDCPRRSLQRGQQHPLAVYYEGPEKGFGVRAAANIKAGELVCEYTG 579

  Fly  1443 EVI----------------DSEEFERRQHLYSKDRNRHYYFMALRGEAVIDATSKGNISRYINHS 1491
            :|.                |.||.|..:.....|.:....|.|:..:.:|.|...|||||:||||
 Worm   580 DVTLLPTSDPVASSSTKTDDGEEQENPEAPERVDSSYDAAFNAMDTKIIISAKKTGNISRFINHS 644

  Fly  1492 CDPNA-----ETQKWTVNGEL-RIGFFSVKPIQPGEEITFDYQY--LRYGRDAQRCYCEAANCRG 1548
            |||::     .::::..:..: |:..:::|.|..|||||..|..  :.:.|.:.:|.|::..|.|
 Worm   645 CDPSSVFVEVYSRRFEEDPLIPRVAVYAIKDIALGEEITIAYYEPGIEWKRSSVKCRCKSTKCMG 709

  Fly  1549  1548
             Worm   710  709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 valS <709..832 CDD:237855
AWS 1358..1410 CDD:197795 14/63 (22%)
SET_SETD2 1410..1551 CDD:380949 48/164 (29%)
WW 2014..2043 CDD:459800
SRI 2266..2355 CDD:462404
set-25NP_499738.3 SET <525..711 CDD:394802 54/185 (29%)
Blue background indicates that the domain is not in the aligned region.

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