DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Set2 and Set1

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_001015221.1 Gene:Set1 / 3354971 FlyBaseID:FBgn0040022 Length:1641 Species:Drosophila melanogaster


Alignment Length:1651 Identity:306/1651 - (18%)
Similarity:539/1651 - (32%) Gaps:501/1651 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RGRGRGRPPKVALSALGNTPPHINPSLKHADAEASPTAPEDQDSGQSECRRSSRKKIIKFDVRDL 80
            |||.|.|..::.....|        |||:                   |.|.|..:.|:.|||  
  Fly   371 RGRDRDRSAEIDQRDRG--------SLKY-------------------CSRYSLHEYIETDVR-- 406

  Fly    81 LNKNRKAHKIQIEARIDSNPSTGHSQSGTTAASTSMSTATASAASASSAATVSRLFSMFEMSHQS 145
                          |..:..|:.:|.|....||...::.:..:.......:..|.::.|:.....
  Fly   407 --------------RSSNTISSYYSASSLPIASHGFNSCSFPSIENIKTWSDRRAWTAFQPDFHP 457

  Fly   146 LPPPPPPPTALEIFAKPRPTQSLIVAQVTSEPSAVGGAHPVQTMAGLPPVTPRKRGRPRKSQLAD 210
            :.||||||..::.:.:....::.||      |:..|      .||.|.|..|        |.:..
  Fly   458 VQPPPPPPEEIDNWDEEEHDKNSIV------PTHYG------CMAKLQPPVP--------SNVNF 502

  Fly   211 AAIIPTVIVPSCSDSDTNSTSTTTSNMSSDSGELPGFPIQKPKSKLRVSLKRLKLGGRLESSDSG 275
            |..:.:|..|: ||..|....|                        |::|       ..:....|
  Fly   503 ATKLQSVTQPN-SDPGTVDLDT------------------------RIAL-------IFKGKTFG 535

  Fly   276 NSPSSSSPEVEPPALQDENAMDERPKQEQNLSRMVDAEENSDSDSQIIFIEIETESPKGEEEQ-- 338
            |:         ||.||                 |..::..:|.....:|.::.::|...|.::  
  Fly   536 NA---------PPFLQ-----------------MDSSDSETDQGKPEVFSDVNSDSNNSENKKRS 574

  Fly   339 -EEGRPVEVEPQDLIDI--DMEL-AKQEPTP-----DPEEDLDEIMVEVLSGPPSLWSADDEAEE 394
             |:...|..:|.:..||  |.|| .|::.:.     :.|.:.|.:.:..||      |.:|..:.
  Fly   575 CEKNNKVLHQPNEASDISSDEELIGKKDKSKLSLICEKEVNDDNMSLSSLS------SQEDPIQT 633

  Fly   395 EEDATVQRATPPGKEPAADSCSSAPRRSRRSAPLSGSSRQGKTLEETFAEIAAESSKQILEAEES 459
            :|          |.|..:...|.....|.::.....:|..|..|    :.|.:||:.::......
  Fly   634 KE----------GAEYKSIMSSYMYSHSNQNPFYYHASGYGHYL----SGIPSESASRLFSNGAY 684

  Fly   460 QDQEEQHILIDLIEDTLSE---------SEVTSSVSPTIEHMVVEEVVVEENQLVDEADEIL--D 513
            ...|....:.....|:.|:         |:....:...::.::        ..:|:|..:||  |
  Fly   685 VHSEYLKAVASFNFDSFSKPYDYNKGALSDQNDGIRQKVKQVI--------GYIVEELKQILKRD 741

  Fly   514 SKQEFVIKKVFSE-----SDNIAASLNKDIFE---PKVETKATC------GEVVP--------RP 556
            ..:..:....|..     .::.:.:.:|.:||   ..|.|...|      .|..|        ..
  Fly   742 VNKRMIEITAFKHFETWWDEHTSKARSKPLFEKADSTVNTPLNCIKDTSYNEKNPDINLLINAHR 806

  Fly   557 EMVTEDVYITEGIAATLEKSAVVTK--------PTTEMIAETKLSDEVVIEPPLKDESDPKQTEV 613
            |:.....|.:.|:.|.:.|.....:        ||.....|..|||:.  |...:.:||.:.:.|
  Fly   807 EVADFQSYSSIGLRAAMPKLPSFRRIRKHPSPIPTKRNFLERDLSDQE--EMVQRSDSDKEDSNV 869

  Fly   614 ELPESKPAVNIPKSERILSAEVETTSSPLVPPECCTLESVSGPVLLETSLSTEEKSNENVETTPL 678
            |:.::                              ....:.|||.::.|.|....|..|      
  Fly   870 EISDT------------------------------ARSKIKGPVPIQESDSKSHTSGLN------ 898

  Fly   679 KTEAAKEDSPPAAPEEEASNSSEEPNFLLEDYESNQEQVAEDEMMKCNNQKGQKQTPLPEMKEPE 743
               :.::.|..:.....:|::|.|               ||.|.:.|                .|
  Fly   899 ---SKRKGSASSFFSSSSSSTSSE---------------AEYEAIDC----------------VE 929

  Fly   744 KP-VAETVSKKEKAMENPARSSPAIVDKKVRAGEMEKKVVKSTKGTVPEKKMDSKKSCAAVTPAK 807
            |. .:|..|.:.....|..:.:..|.::.: .|.|:              .::.:..|:.     
  Fly   930 KARTSEEDSPRGYGQRNLNQRTTTIRNRNL-VGTMD--------------VINVRNLCSG----- 974

  Fly   808 QKESGKSAKEAILKKETEKEKSSAKLDSSSPNTL--DKKGKDTAQWSPQLQTLPKSSTKPPQESA 870
               |.:..||.:.|:  .|:...:..|..:..||  ..|.|:.:.....|:.:.|.|.....|:.
  Fly   975 ---SNEFKKENVTKR--TKKNIYSDTDEDNDRTLFPALKEKNISTILSDLEEISKDSCIGLDENG 1034

  Fly   871 --PSVISKTTSNQPAPKEEQHAAKKGLSDNSPPSVLKAKEKAVSGFVECDAMFKAMDLANAQLRL 933
              |:::.| ..|.|...||   .::.|:...||           |:                   
  Fly  1035 IEPTILRK-IPNTPKLNEE---CRRSLTPVPPP-----------GY------------------- 1065

  Fly   934 DEKNKKKLKKVPTKVEAPPKVEPPTAVPVPGQKKSLSGKTSLRRNTVYEDSPN----LERNSSPS 994
               |::::||                      |.....|.|...:.:|.||..    .||....:
  Fly  1066 ---NEEEIKK----------------------KVDCKQKPSFEYDRIYSDSEEEKEYQERRKRNT 1105

  Fly   995 SDSAQANTSAGKLKPSKVKKKINPRRSTICEAAKDLRSSSSSSTPTREVAASSPVSTSSDSSSKR 1059
            ...||......:.:..:::|.::....:.....|:..|..:.:..||:.|.|             
  Fly  1106 EYMAQMEREFLEEQEKRIEKSLDKNLQSPNNIVKNNNSPRNKNDETRKTAIS------------- 1157

  Fly  1060 NGSKRTTSDLDGGSKLDQRRYTICEDRQPETAIPVPLTKRRFSMHPKASANPLHDTLLQTAGKKR 1124
                :|.|..:..||:|.....|         |.|......|..|.:.      |.|.....|..
  Fly  1158 ----QTRSCFESASKVDTTLVNI---------ISVENDINEFGPHEEG------DVLTNGCNKMY 1203

  Fly  1125 GRKEG--KESLSRQNSLDSSSSASQGA--------------------PKKKALKSAEILSAALLE 1167
            ...:|  |.:.|...|...||.|||.:                    |..|..::..||.     
  Fly  1204 TNSKGKTKRTQSPVYSEGGSSQASQASQVALEHCYSLPPHSVSLGDYPSGKVNETKNILK----- 1263

  Fly  1168 TESSESTSSGSKMSRWDVQTSPELEAANPFGDIAKFIEDGVNLLKRDKVDEDQRKEGQDEVKREA 1232
             ..:|:.:..|:|:|    |.|.....:|.            .:::.|.|...|   ...||.:.
  Fly  1264 -REAENIAIVSQMTR----TGPGRPRKDPI------------CIQKKKRDLAPR---MSNVKSKM 1308

  Fly  1233 DPEEDEFAQRVANMETPATTPTPSPTQSNPEDSASTTTVLK---ELETGGGVRRSH--RIKQKPQ 1292
            .|..||:.. :|:............|:...|:.....|.|.   :.|....::.|:  .:.::|.
  Fly  1309 TPNGDEWPD-LAHKNVHFVPCDMYKTRDQNEEMVILYTFLTKGIDAEDINFIKMSYLDHLHKEPY 1372

  Fly  1293 G-------------------PRASQGRGVASVALAPISMDEQLAELANIEAINEQFLRSEGLNTF 1338
            .                   |..|:.|          ..|::|.......|..|.|.:   |:..
  Fly  1373 AMFLNNTHWVDHCTTDRAFWPPPSKKR----------RKDDELIRHKTGCARTEGFYK---LDVR 1424

  Fly  1339 QLLKENFYRCARQVSQENAEMQCD--CFLTGD------EEAQGHLSCGAGCINRMLMIECGPLCS 1395
            :..|..::...........|.:.|  ..||..      .:.|| :|..|....|.|:...|.:..
  Fly  1425 EKAKHKYHYAKANTEDSFNEDRSDEPTALTNHHHNKLISKMQG-ISREARSNQRRLLTAFGSMGE 1488

  Fly  1396 NGARCTNK-RFQQHQCWPCRVFRTEKKGCGITAELLIPPGEFIMEYVGEVIDSEEFERRQHLYSK 1459
            :.....|: :|::.|   .:..::.....|:.|...|...|.::||||::|.....:.|:..|..
  Fly  1489 SELLKFNQLKFRKKQ---LKFAKSAIHDWGLFAMEPIAADEMVIEYVGQMIRPVVADLRETKYEA 1550

  Fly  1460 DRNRHYYFMALRGEAVIDATSKGNISRYINHSCDPNAETQKWTVNGELRIGFFSVKPIQPGEEIT 1524
            ......|...:..|.:||||..||::|:|||||:||...:..|:..|.:|..:|.:||...||||
  Fly  1551 IGIGSSYLFRIDMETIIDATKCGNLARFINHSCNPNCYAKVITIESEKKIVIYSKQPIGINEEIT 1615

  Fly  1525 FDYQYLRYGRDAQR--CYCEAANCRG 1548
            :||   ::..:.::  |.|.|..|||
  Fly  1616 YDY---KFPLEDEKIPCLCGAQGCRG 1638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795 13/60 (22%)
SET 1414..1533 CDD:214614 39/118 (33%)
PostSET 1535..1551 CDD:214703 6/16 (38%)
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
Set1NP_001015221.1 RRM_Set1 99..191 CDD:240750
DUF1777 255..>380 CDD:285811 5/8 (63%)
PRP38_assoc <318..388 CDD:289628 6/24 (25%)
N-SET 1341..1492 CDD:288597 26/164 (16%)
SET <1463..1641 CDD:225491 55/183 (30%)
SET 1504..1625 CDD:214614 39/123 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467630
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
32.870

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