DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and suv39h1b

DIOPT Version :10

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_001119954.1 Gene:suv39h1b / 326906 ZFINID:ZDB-GENE-030131-5105 Length:421 Species:Danio rerio


Alignment Length:387 Identity:98/387 - (25%)
Similarity:148/387 - (38%) Gaps:103/387 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1208 VNLLKRDKVDEDQRKEGQDEVKREADPEEDEFAQRVANMETPATTPTPSPTQSNPEDSASTTTVL 1272
            ||||  .:..||...|.|.:.||.|....|           |||.       ::....|.....|
Zfish    93 VNLL--SQFWEDLNAEMQRQNKRSAPRRLD-----------PATV-------THLTQRAKLRQTL 137

  Fly  1273 KELETGGGVRRSHRIKQKPQGPRASQGRGVASVALAPISMDEQLAELANIEAINEQFLRSEGLNT 1337
            |:.||......:|:                     ..||:..|:    ::|...:.|       |
Zfish   138 KQWETHLNSLGTHK---------------------GYISVRNQV----DLEGPPKSF-------T 170

  Fly  1338 FQLLKENFYRCARQVSQENAEMQCDCFLTGDEEAQGHLSCGAGCINR---------------MLM 1387
            :    .|.|:....:......:.|:|........:|   |.||....               :.:
Zfish   171 Y----INDYKVGDGILLNEVSVGCECTDCLASPVEG---CCAGASQHKFAYNELGQVRIRPGLPI 228

  Fly  1388 IECGPLCSNGARCTNKRFQQHQCWPCRVFRTEK-KGCGITAELLIPPGEFIMEYVGEVIDSEEFE 1451
            .||...|..|..|:|:..|:...:...:|||:. :|.|:.....|....|:||||||:|.:||.|
Zfish   229 YECNKRCRCGPDCSNRVVQRGIRYSLCIFRTDNGRGWGVRTMERIRKNTFVMEYVGEIITTEEAE 293

  Fly  1452 RRQHLYSKDRNRHYYFM-ALRGEAVIDATSKGNISRYINHSCDPNAETQKWTVNG---EL-RIGF 1511
            ||.|:|.|:...:.:.: .:..|..:||...||||.::|||||||.:.....::.   .| ||.|
Zfish   294 RRGHVYDKEGATYLFDLDYVDDEYTVDAAHYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAF 358

  Fly  1512 FSVKPIQPGEEITFDYQYLRYGRDAQ-----------------------RCYCEAANCRGWI 1550
            |:.:.|:.|||:||||.......||:                       .|.|..|.||.::
Zfish   359 FATRGIKAGEELTFDYNMKIDPVDAESTKMDTNFGVMGLPGSPKKRMRVECKCGVATCRKYL 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 valS <709..832 CDD:237855
AWS 1358..1410 CDD:197795 13/66 (20%)
SET_SETD2 1410..1551 CDD:380949 56/170 (33%)
WW 2014..2043 CDD:459800
SRI 2266..2355 CDD:462404
suv39h1bNP_001119954.1 CD_SUV39H1_like 45..99 CDD:349289 4/7 (57%)
SET 167..421 CDD:394802 73/268 (27%)
Blue background indicates that the domain is not in the aligned region.

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