DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and G9a

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_001259088.1 Gene:G9a / 30971 FlyBaseID:FBgn0040372 Length:1657 Species:Drosophila melanogaster


Alignment Length:1821 Identity:365/1821 - (20%)
Similarity:596/1821 - (32%) Gaps:572/1821 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KHADAEASPTAPEDQDSGQSECRRSSRKKIIKFDVRDLLN---------KNRKAHKI------QI 92
            ||.|.|         :..:.|.|.....:.||..:.|:::         :.:.|.|:      :|
  Fly    56 KHKDKE---------EEERKEARNQEEIEDIKALLADVVDAAAVKLEEEEAQNAEKVEPHTKCEI 111

  Fly    93 E-------------ARIDSNPSTGHSQSG-TTAASTSMSTATASAASASSAATVS------RLFS 137
            |             |:.||...  ..|:| .|:.:..|.:...:...|:..||.|      ..|.
  Fly   112 EEEGRKEMEYDQDVAKQDSEME--KKQNGKATSITVKMESNERAEKHATEIATTSTERWENESFK 174

  Fly   138 MFEMSHQSLPPPPPPPTA----LEIFAKPRPTQSLIVAQVTSEPSAVGGAH-----------PVQ 187
            ..:.:.::......|..|    ||..|:|..|..:.||  .:.|..|..|.           ...
  Fly   175 TEQQNKKAAEKEEEPILAATQKLEANAEPLTTTRIEVA--VASPLVVSSASVKLAADATNQMRAA 237

  Fly   188 TMAGL-----------PPVTPRKRGRPRKSQLADAAIIPTVIVPSCSDSDT---NSTSTTTSNMS 238
            |.||.           |..|.|.|..||          |.....|.:|...   |.....:...:
  Fly   238 TSAGAATLADKNVQVSPGGTRRSRRTPR----------PIDTPTSVTDEHVQVENKKFGKSEQYT 292

  Fly   239 SDSGELPGFPIQKPKSKLRVSLKRLKLGGRLESSDSGNSPSSSSPEVEPPALQDENAMDERPKQE 303
            ..|..|..|.:....:.:|:.||         |.....|.::.|||        ||:. ..||:.
  Fly   293 DCSSHLERFTLDDNTAIVRLQLK---------SEPDKPSLTALSPE--------ENSA-PAPKRG 339

  Fly   304 QNLSRMV--DAEENSDSDSQIIFIEIETESPKGEEEQEEGRPVEVEP---QDLIDIDMELAKQEP 363
            :..:|.:  |||..:   |::|   :..|...||::....|.:..||   |.|.|:.:...:||.
  Fly   340 RGRARKIRPDAEVET---SEVI---LPCEDSLGEKKPGRKRKLPDEPIDQQQLSDLVVVKTEQEE 398

  Fly   364 TPD-PEEDL--------------------DEIMVEVLSGPPS--LWSADDEAEEEEDATVQRATP 405
            ..| |..|:                    :|:..|.|...||  |..|:..:|....|.:...||
  Fly   399 LGDAPLGDVKRMRRSVRLGNRLHADGSPWEEVKTEALHPQPSAELSFAEVTSEILPLAVLDEKTP 463

  Fly   406 PGK--EPAADSCSSAPRRSRRSAPLSGSSRQGKTLEETFAEIAAESSK------QILEAEESQ-D 461
            |.|  ..|...|......:....|.:..:::..:......::...|.:      :|||.:|.: :
  Fly   464 PKKRGRKAKTPCVKLESETSCGLPFANGNKKTNSSGGCELQLPKRSKRRIKPTPKILENDELRCE 528

  Fly   462 QEEQHILIDLIEDTLSESEVTSSVSPTIEHMVVEEVVVEENQLVDEADEILDSKQE--------- 517
            .|.:||      :.:::.|..::|....|...........:....::|:...|..|         
  Fly   529 FETKHI------ERMTQWESAAAVDGDFETPTTGGNGSNSSTSRQKSDKSDGSNFEGGPGHPAGT 587

  Fly   518 -FVIKKVFSES----DNI-AASLNKDIFEPKVETKATCGEVVPRPEMVTEDVYITEGIAATLEKS 576
             .:.|::||:|    :|. ||.|.|....|       |.:|    |....|:..:...|....:.
  Fly   588 SAIKKRLFSKSQRDIENYGAAMLAKSKLPP-------CPDV----EQFLNDIKASRINANRSPEE 641

  Fly   577 AVVTKPTTEMIAETK--------LSDEVVIEPPLKDESDPKQ-----TEVELPESKPAVNIPKSE 628
            ..:.|.....:|:.|        |......||...|.|:...     |.|::  .||:|.: :..
  Fly   642 RKLNKKQQRKLAKQKEKHLKHLGLQKNHRDEPSDNDSSNTDNEFFPTTRVQV--GKPSVTL-RVR 703

  Fly   629 RILSAEVETTSSPLVPPECCTLESVSGPVLLETSLSTEEKSNENVETTPLKTEAAKEDSPPAAPE 693
            ..::.|:.||:         ||:|...||:....|:....:....|.    ||||:...|.:.|:
  Fly   704 NSVTKELPTTA---------TLKSRRNPVVQAAKLTRRIGARAAGEV----TEAARASVPISTPD 755

  Fly   694 EEASNSSEEPNFLLEDYESNQEQVAEDEMMKCNNQKGQKQTPLPEMKEPEKPVAETVSK----KE 754
            .|..:|.:         .|.|..|                ||:.::  ..:|....|||    .:
  Fly   756 AEQLHSLD---------TSIQADV----------------TPIRDL--DMRPSTSRVSKFICLCQ 793

  Fly   755 KAMENPARSSP---------AIVDKKVR-AGEMEKKVVKSTKGT----------VPEKKMDSKKS 799
            |..:..||::|         .|.|:|:. ..|:..:|....:.:          ..:|::.|...
  Fly   794 KPSQYYARNAPDSSYCCAIDHIDDQKIGCCNELSSEVHNLLRPSQRVSYMILCDEHKKRLQSHNC 858

  Fly   800 CAA---------VTPAKQKE--SGKSAKEAILKKETEKE---KSSAKLDSSSPNTLDK---KGKD 847
            ||.         ....||:.  ....|:..||....|||   :....:..|||..:.|   .|.|
  Fly   859 CAGCGIFCTQGKFVLCKQQHFFHPDCAQRFILSTSYEKELGDEEDQGVKFSSPVLVLKCPHCGLD 923

  Fly   848 TAQWSP----QLQTLP------KSSTKPPQESAPSVISK--TTSNQPAPKEEQHAAKKGLSD--- 897
            |.:.:.    :.|:||      |...||.:.:..|.:::  |..|...|..... .|.|||.   
  Fly   924 TPERTSTVTMKCQSLPVFLRTQKYKIKPARLTTSSHLTQFGTVENANTPGATAR-NKGGLSTAVT 987

  Fly   898 ----NSPPSVLKAKEKAVSGFVECDAMFKAMDLANAQLRLDEKNKKKLKKVPTKVEAPPKVEPPT 958
                :||.|.....::..:|....::......:..|||            :|..|         .
  Fly   988 LSAASSPASKTNGAQRGRAGTSNSNSRHALNSINFAQL------------IPESV---------M 1031

  Fly   959 AVPVPGQKKSLSGKTSLR---RNTVYE-DSPNLERNSSPSSDSAQANTSAGKLKPSKVKKKINPR 1019
            .|.:.|...|.||:.:..   |:..|. .:.:|||                              
  Fly  1032 NVVLRGHVVSASGRVTAEFTPRDMYYAVQNDDLER------------------------------ 1066

  Fly  1020 RSTICEAAKDLRSSSSSSTPTRE---------VAASSPVSTSSDSSSKRNGSKRTTSDLDGGSKL 1075
                  .|:.|.:..:..||.||         ||.|..:..:.....|...|....:.:|    .
  Fly  1067 ------VAEILAADFNVLTPIREYLNGTCLHLVAHSGTLQMAYLLLCKGASSPDFVNIVD----Y 1121

  Fly  1076 DQRRYTICEDRQ-------------PETAIPVPLTKRRFSMHPKASANPLHDTLLQTAGKKRGR- 1126
            :.|...:|....             .:.||..|..|.  |:|..|....|..|.|.....:..| 
  Fly  1122 ELRTALMCAVMNEKCDMLNLFLQCGADVAIKGPDGKT--SLHIAAQLGNLEATQLIVDSYRTSRN 1184

  Fly  1127 -----------------------KEGKESLSRQNSLDSSSSASQGAPKKKALKSAEI-LSAALLE 1167
                                   :.|...:.|..||          |:...||...| |..:.|.
  Fly  1185 ITSFLSFIDAQDEGGWTAMVWAAELGHTDIVRLASL----------PQAVFLKLINIFLFISFLL 1239

  Fly  1168 TESSEST---SSGSKMSRWD-------------VQTSPELEAANPFGD----IA----------K 1202
            .:.::..   :..:.:..|.             :|:..:....|..||    ||          .
  Fly  1240 NQDADPNICDNDNNTVLHWSTLHNDGLDTITVLLQSGADCNVQNVEGDTPLHIACRHSVTRMCIA 1304

  Fly  1203 FIEDGVNLLKRDKVDEDQRKEGQDEVKREADP-EEDEFAQRVA-NMETPATTPTPSPTQSNPEDS 1265
            .|.:|.:|:.::|.         :::..:..| ||.|..:.|. ||:                  
  Fly  1305 LIANGADLMIKNKA---------EQLPFDCIPNEESECGRTVGFNMQ------------------ 1342

  Fly  1266 ASTTTVLKELETGGGVRRSHRIKQKPQGPR-------ASQGRGVASVALAPISMDEQLAELANIE 1323
                            .||.|    |.|.|       ||.||                 |...|:
  Fly  1343 ----------------MRSFR----PLGLRTFVVCADASNGR-----------------EARPIQ 1370

  Fly  1324 AINEQFLRSEGLN-------------TFQLLKENFYRCARQVSQEN--------AEMQCDCFLTG 1367
            .:..:...||..:             |..::::|..:..|:|||..        :..:|.|....
  Fly  1371 VVRNELAMSENEDEADSLMWPDFRYVTQCIIQQNSVQIDRRVSQMRICSCLDSCSSDRCQCNGAS 1435

  Fly  1368 DEE---AQGHLSCGAGCINRMLMIECGPLCS-NGARCTNKRFQQHQCWPCRVFRTE--KKGCGIT 1426
            .:.   |:..|:......:..::.||..:|. |...|.|:..|.....|.::...|  .||.|:.
  Fly  1436 SQNWYTAESRLNADFNYEDPAVIFECNDVCGCNQLSCKNRVVQNGTRTPLQIVECEDQAKGWGVR 1500

  Fly  1427 AELLIPPGEFIMEYVGEVIDSEEFERRQHLYSKDRNRHYYFMALRGEAVIDATSKGNISRYINHS 1491
            |...:|.|.|:..|.||::.:.|.:||       .:..|||....|.. |||...||::|:.|||
  Fly  1501 ALANVPKGTFVGSYTGEILTAMEADRR-------TDDSYYFDLDNGHC-IDANYYGNVTRFFNHS 1557

  Fly  1492 CDPNA-------ETQKWTVNGELRIGFFSVKPIQPGEEITFDY--QYLRY-GRDAQRCYCEAANC 1546
            |:||.       |.|.:...   :|.|||.:.|..||||.|||  ::.|. .|....|.|....|
  Fly  1558 CEPNVLPVRVFYEHQDYRFP---KIAFFSCRDIDAGEEICFDYGEKFWRVEHRSCVGCRCLTTTC 1619

  Fly  1547 R 1547
            :
  Fly  1620 K 1620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795 11/55 (20%)
SET 1414..1533 CDD:214614 45/130 (35%)
PostSET 1535..1551 CDD:214703 3/13 (23%)
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
G9aNP_001259088.1 ATP-synt_B 150..248 CDD:304375 20/99 (20%)
Ank_2 1056..1152 CDD:289560 19/135 (14%)
ANK 1088..1217 CDD:238125 20/134 (15%)
ANK repeat 1088..1120 CDD:293786 5/31 (16%)
ANK repeat 1124..1153 CDD:293786 4/28 (14%)
Ank_2 1127..1249 CDD:289560 22/133 (17%)
ANK 1155..1306 CDD:238125 25/162 (15%)
ANK repeat 1155..1196 CDD:293786 8/42 (19%)
ANK repeat 1199..1249 CDD:293786 10/59 (17%)
Ank_2 1205..1316 CDD:289560 20/120 (17%)
ANK repeat 1251..1283 CDD:293786 2/31 (6%)
ANK repeat 1285..1316 CDD:293786 7/30 (23%)
PreSET 1357..1466 CDD:128744 20/125 (16%)
SET 1495..1602 CDD:214614 43/117 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467626
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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