DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and cti6

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_595212.1 Gene:cti6 / 2539769 PomBaseID:SPBC1685.08 Length:424 Species:Schizosaccharomyces pombe


Alignment Length:445 Identity:89/445 - (20%)
Similarity:155/445 - (34%) Gaps:114/445 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   666 EEKSNENVETTPLKTEAAKEDSPPAAPEEEASNSSEEPNFLLEDYESNQEQVAEDEMMKCNN--- 727
            :|:.:|.::.:|:.|......|.....|.|.|::.|....:....||:.|.......::|:.   
pombe    12 KEEESEKIQKSPVDTPHTPNGSVSDNEENETSSTGEVTRCVCGIVESDDEASDGGLYIQCDQCSV 76

  Fly   728 -QKGQ-----KQTPLPEMK-----EPE--------------------KPVAETVSKKEKAMENPA 761
             |.|.     .::.:||:.     .||                    ||:  ..|:.|::...| 
pombe    77 WQHGNCVGFADESEVPEVYYCEICHPEFHKVYQRGRGAKQSKYLGNGKPI--EASQTEESSSTP- 138

  Fly   762 RSSPAIVDKKVRAGEMEKK----------VVKSTKGTVPEKKMDSKKSCAAVTPAKQKESGKSAK 816
             .|||......:...|..:          .:...|..:|.:......|.:...||.|.||  ...
pombe   139 -PSPATKKSSKQRLTMNSRDAALDYEEYLAIAKEKSLIPRRSRGRTSSKSLSPPAPQDES--QGT 200

  Fly   817 EAILKKETEKEKSSAKLDSSSPNTLDKKGKDTAQWSPQLQTLPKSSTKPPQESAPSVISKTTSNQ 881
            |..||::.|:|......||       |:.||..:.:.:..|...:.|..|:|.....:.:...  
pombe   201 EINLKQKIEEENDEILEDS-------KESKDENEENKETSTTNVAETDAPEEETVDTVEEIAD-- 256

  Fly   882 PAPKEEQHAAKKGLSDNSPPSVLKAKEKAVSGFVECDAMFKAMDLANAQLRLDEKNKKKLKKVPT 946
                ||:|:.|:...:.||.|..::...::|                       ...:..:|...
pombe   257 ----EEKHSVKEESGEASPQSSQQSTITSIS-----------------------TTTRSTRKAKR 294

  Fly   947 KVEAPPKVEPPTAV-PVPGQKKSLSGKTSLRRNTVYEDSPNLERNSSPSSDSAQANTSAGKLKP- 1009
            :..|..|.:.|.|| |.|.:.:.:.|:                |..|.|:|    |....:|.| 
pombe   295 EAAAEDKADLPAAVAPKPSKTRKVGGR----------------RGKSSSND----NHRIPQLHPD 339

  Fly  1010 -SKVKKKINPR----RSTICEAAKDLRSSSSSSTPTR-EVAASSPVSTSSDSSSK 1058
             :.|:....|:    |.|:.|..:.:.|........: |:||.|..:.||..|||
pombe   340 GTFVETITKPKGLHSRITMTEMRRRVASMLEYIGHIQVEMAAQSAGNQSSTKSSK 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795
SET 1414..1533 CDD:214614
PostSET 1535..1551 CDD:214703
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
cti6NP_595212.1 PHD_SF 50..100 CDD:304600 8/49 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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