DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Set2 and set1

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_587812.1 Gene:set1 / 2538762 PomBaseID:SPCC306.04c Length:920 Species:Schizosaccharomyces pombe


Alignment Length:921 Identity:194/921 - (21%)
Similarity:316/921 - (34%) Gaps:268/921 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   753 KEKAMENPARSSPAIVDKK--VRAGEMEKKVVKSTKGTVPEKKMDSKKSCAAVTPAKQKESGKSA 815
            |..::...|.|:...|.:.  :|.......||....|::.|:..  ||:..||.        |..
pombe   144 KRSSISVAAHSAKIAVQQANGLRFSGKPLSVVLDRDGSLCEEAF--KKALNAVE--------KQF 198

  Fly   816 KEAILKK---ETEKEKSSAKLDSSSPNTLDKKGKDTAQW---SPQLQTLPKSSTKPPQESAPSVI 874
            :|..|:|   |.|.|.|..||.::       ..:|...|   |...|||.....:  .....:|.
pombe   199 QEETLQKQRFEREDESSRQKLSAA-------MNEDIPPWRQPSKNSQTLSNGDLQ--HSKVQNVD 254

  Fly   875 SK----TTSNQPAPK-----------------------EEQHAAKKGLSDNSPPSVLKAKEK--- 909
            .|    |:|....||                       :.:|..:|.|.:    .:...|:.   
pombe   255 QKSGFLTSSETDVPKNINDYIYLLIDDRFVPPDRVYYTDIKHHFRKFLYE----KIYMNKDGFYI 315

  Fly   910 AVSGFVECDAMFKAMD---LANAQLRL---------DEKNKKK---------------------- 940
            ..:.:.|....::|:|   :.|.:::|         .|..||.                      
pombe   316 TFNNYREASNCYRALDRTYVQNCRIKLKFHDIPSRTKEDGKKSAVRRVVLPPEEAYAEATSVVLR 380

  Fly   941 ------LKKVPTKVEAPPKVEPPTAVPVPGQKKSLSGKTSLRRNTVYEDSPNLERNSS----PS- 994
                  |:.|.:|:..|...:...::|.|..|:.|. :..|..:|...|.| |:..|:    || 
pombe   381 DLEAALLRDVKSKIIGPAIFKYLHSMPKPSVKEELQ-ENLLVSSTSVPDVP-LKIESTVGKLPSL 443

  Fly   995 ------SDSAQANTSAGKLKPSKVKKKINPRRSTICEAA-------KDLRSSSSSSTPTREVAAS 1046
                  .||::.|.|||    ||.|.|:..||....||.       :...||:|.:...:|:..|
pombe   444 PKFKKRVDSSKMNLSAG----SKTKSKLQRRRRRRHEARPLHYQLNQMYNSSASEAESDQELLLS 504

  Fly  1047 SPVSTSSDSSSKRNGSKRTTSDLDGGSKLDQRRYTICEDRQPETAIPVPLTKRRFSMHPKASANP 1111
            |                       |..::::.:....:..:.:.|.||      ||         
pombe   505 S-----------------------GDERVERGKIGSIKSVKSDEATPV------FS--------- 531

  Fly  1112 LHDT--------LLQTAGKKRGRKEGKESLSRQNSLDSSSSASQGAPKKKALKSAEILSAALL-- 1166
              ||        ..:|..|...:|..|..:...:|.::.|.||..:|.....||...:...|:  
pombe   532 --DTSDENDKFHRFRTKSKISKKKYEKMEVDYTSSSETESDASILSPSAAIPKSGSAIKDELISP 594

  Fly  1167 ETESSESTSSGSKMSRWDV----QTSPELEAANPFGDIAKFIEDGVNLLKRD------KVDEDQR 1221
            :.|..|..:...|   |.:    :|......|.|:    .:.||.| ||..|      |.|||. 
pombe   595 KKEIDEVLALAPK---WRINEFDETGSVYYGALPY----NYPEDDV-LLDLDGLQYLVKNDEDY- 650

  Fly  1222 KEGQDEVKREA-----DPEEDEFAQRVANMETPATTPTPSPTQSNPEDSASTTTVLKELETGGGV 1281
            ...|:.:|.|.     ||....:.::....:             |.:.....|.:|.|       
pombe   651 SYLQEALKDEPLMDINDPNFWAYERKSCKFK-------------NGDVKYGDTAILPE------- 695

  Fly  1282 RRSHRIKQKPQGPRASQGRGVASVALAPISMDEQLAELANIEAINEQFLRSEGLNTFQLLKENFY 1346
                     |:|...|...|.|                           :|||.......:::.|
pombe   696 ---------PKGYFRSNTSGSA---------------------------KSEGYYIIPTTEKSLY 724

  Fly  1347 RCARQVSQENAEMQCDCFLTGDEEAQGHLSCGAGCINRMLMIECGPLCSNGARCTNKRFQQHQCW 1411
            ...|..|..:........:|.......:....||.....|..|...|..|..:...|   |....
pombe   725 LPLRNRSTIDTISHSTSRITSRMNRVNNRRLAAGVEKSQLPAEADLLRFNALKARKK---QLHFG 786

  Fly  1412 PCRVFRTEKKGCGITAELLIPPGEFIMEYVGEVIDSEEFERRQHLYSKDRNRHYYFMALRGEAVI 1476
            |.|:..     .|:.|...|...:.::||:||:|.....:.|:..|.::.....|...:..:.::
pombe   787 PSRIHT-----LGLFAMENIDKNDMVIEYIGEIIRQRVADNREKNYVREGIGDSYLFRIDEDVIV 846

  Fly  1477 DATSKGNISRYINHSCDPNAETQKWTVNGELRIGFFSVKPIQPGEEITFDYQYLRYGRDAQR--C 1539
            |||.||||:|:|||||.||...:...|.|:.:|..::.:.|..|||:|:||   ::..:|.:  |
pombe   847 DATKKGNIARFINHSCAPNCIARIIRVEGKRKIVIYADRDIMHGEELTYDY---KFPEEADKIPC 908

  Fly  1540 YCEAANCRGWI 1550
            .|.|..|||::
pombe   909 LCGAPTCRGYL 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795 9/51 (18%)
SET 1414..1533 CDD:214614 37/118 (31%)
PostSET 1535..1551 CDD:214703 7/18 (39%)
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
set1NP_587812.1 RRM <90..>226 CDD:223796 23/98 (23%)
RRM_spSet1p_like 96..180 CDD:240749 7/35 (20%)
SET_assoc 279..342 CDD:288600 8/66 (12%)
SET 457..920 CDD:225491 128/583 (22%)
N-SET 641..771 CDD:288597 29/186 (16%)
SET 783..899 CDD:214614 38/123 (31%)
PostSET 904..920 CDD:214703 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.